Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RNA5SP307-201ENST00000362863 116 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 Y_RNA.158-201ENST00000363651 101 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RNU6-288P-201ENST00000363690 104 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RNU6-1059P-201ENST00000363752 98 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 Y_RNA.193-201ENST00000363979 102 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 Y_RNA.527-201ENST00000384573 102 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RNU6-306P-201ENST00000384617 107 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AL391417.1-201ENST00000404100 426 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RNA5SP239-201ENST00000410218 129 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 HMGB3P2-201ENST00000411913 584 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 MTCYBP9-201ENST00000431021 303 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RPS6P12-201ENST00000432491 726 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 VDAC1P3-201ENST00000434069 851 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RPL12P25-201ENST00000455592 494 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC034236.1-201ENST00000469891 373 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 HMGB1P30-201ENST00000492455 606 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC146944.2-203ENST00000502493 354 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC139495.1-202ENST00000513164 354 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 SNORA31.3-201ENST00000516029 96 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AP004242.1-201ENST00000533701 349 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RPL23AP97-201ENST00000568955 471 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 RPL23AP87-202ENST00000573039 466 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 MIR3941-201ENST00000582572 103 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AC018462.2-201ENST00000605375 395 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AL713922.2-201ENST00000619384 716 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 MIR4727-201ENST00000622232 55 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4BP1P59074 ZNF807-201ENST00000328088 1707 ntBASIC4.75□□□□□ -1.65
CHMP4BP1P59074 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC138393.1-203ENST00000327086 343 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RNU6-600P-201ENST00000362524 99 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RNU6-190P-201ENST00000384154 102 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RNU6-328P-201ENST00000390887 106 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RNU6-1050P-201ENST00000410388 107 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 SNORA74C-2-201ENST00000411179 201 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 CYCSP19-201ENST00000411715 316 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 SNAP23P1-201ENST00000433229 246 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 GSTA11P-201ENST00000452866 669 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RNA5SP384-201ENST00000516615 116 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RN7SKP258-201ENST00000517151 304 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 RNU6-323P-201ENST00000521915 107 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC006006.1-201ENST00000603082 144 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC012119.1-201ENST00000603184 222 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 MIR432-201ENST00000606207 94 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC002044.1-201ENST00000606707 158 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC006133.1-201ENST00000617106 264 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 AC027290.2-201ENST00000623210 18662 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 PRO1804-201ENST00000623780 2050 ntBASIC4.74□□□□□ -1.65
CHMP4BP1P59074 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CHMP4BP1P59074 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4BP1P59074 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4BP1P59074 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4BP1P59074 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4BP1P59074 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4BP1P59074 SNORD3E-201ENST00000362899 217 ntBASIC4.73□□□□□ -1.65
CHMP4BP1P59074 RNU6-434P-201ENST00000384376 107 ntBASIC4.73□□□□□ -1.65
CHMP4BP1P59074 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4BP1P59074 AC243428.1-201ENST00000421099 264 ntBASIC4.73□□□□□ -1.65
CHMP4BP1P59074 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms