Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDL3P58872 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RHBDL3P58872 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 RNU6-348P-201ENST00000384386 107 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDL3P58872 AL138885.1-201ENST00000405921 675 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.77□□□□□ -1.81
RHBDL3P58872 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDL3P58872 SKA2P1-201ENST00000425592 390 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 GTF2IP20-201ENST00000431663 360 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 RPL23AP58-201ENST00000440453 469 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 RPS3AP14-201ENST00000483907 780 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 AC092185.1-201ENST00000491371 97 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 SEM1P1-201ENST00000506694 209 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 AC113155.1-201ENST00000511141 769 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.77□□□□□ -1.81
RHBDL3P58872 RANP3-201ENST00000530970 276 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDL3P58872 AL157871.3-201ENST00000557231 293 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 AC008739.2-201ENST00000597006 317 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 AL158032.1-201ENST00000605401 106 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 AC004908.3-201ENST00000610248 625 ntBASIC3.77□□□□□ -1.81
RHBDL3P58872 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDL3P58872 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.77□□□□□ -1.81
RHBDL3P58872 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RHBDL3P58872 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.77□□□□□ -1.81
RHBDL3P58872 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDL3P58872 Y_RNA.33-201ENST00000362591 102 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 RNU6-658P-201ENST00000384606 106 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.76□□□□□ -1.81
RHBDL3P58872 CST9LP2-201ENST00000437612 320 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 NANOGNBP1-201ENST00000448444 480 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC023194.1-201ENST00000493084 308 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC105252.1-201ENST00000503089 286 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC009901.1-201ENST00000506703 541 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AP002963.1-201ENST00000530590 184 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.76□□□□□ -1.81
RHBDL3P58872 MIR4782-201ENST00000577987 79 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
RHBDL3P58872 MIR15A-201ENST00000607334 83 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC099842.1-201ENST00000619919 596 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 AC025034.2-201ENST00000623264 286 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 SCARNA15.3-201ENST00000626315 122 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 SCARNA4.1-201ENST00000628597 123 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 U6.114-201ENST00000636407 96 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 U6.99-201ENST00000637524 83 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 MIR622-201ENST00000638396 96 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDL3P58872 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDL3P58872 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RHBDL3P58872 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RHBDL3P58872 AC103710.2-202ENST00000641454 2853 ntBASIC3.76□□□□□ -1.81
RHBDL3P58872 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RHBDL3P58872 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RHBDL3P58872 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
RHBDL3P58872 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RHBDL3P58872 ADAM3A-203ENST00000461344 2157 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 SNORA80A-201ENST00000363922 136 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 SNORA24.1-201ENST00000384401 135 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 RPL5P18-201ENST00000406671 891 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 SNORA11.2-201ENST00000408318 127 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 RN7SKP220-201ENST00000410611 288 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 AC092809.3-201ENST00000415453 231 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.75□□□□□ -1.81
RHBDL3P58872 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.75□□□□□ -1.81
RHBDL3P58872 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.75□□□□□ -1.81
RHBDL3P58872 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
RHBDL3P58872 MTND1P29-201ENST00000448112 647 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.75□□□□□ -1.81
RHBDL3P58872 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.75□□□□□ -1.81
RHBDL3P58872 MTCO2P18-201ENST00000457151 658 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 RPS29P20-201ENST00000489592 171 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 AC117522.2-201ENST00000510049 657 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 AC079140.3-201ENST00000511111 550 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 RNU6-1220P-201ENST00000517126 108 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.75□□□□□ -1.81
RHBDL3P58872 AP001646.1-201ENST00000527936 915 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.75□□□□□ -1.81
RHBDL3P58872 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.75□□□□□ -1.81
RHBDL3P58872 MIR3611-201ENST00000584484 83 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.75□□□□□ -1.81
RHBDL3P58872 AC020895.1-201ENST00000595362 272 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.75□□□□□ -1.81
RHBDL3P58872 AC091834.1-201ENST00000614543 472 ntBASIC3.75□□□□□ -1.81
RHBDL3P58872 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.75□□□□□ -1.81
RHBDL3P58872 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms