Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC097478.2-201ENST00000610572 514 ntBASIC2.1□□□□□ -2.07
VSX2P58304 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC008498.1-201ENST00000613012 531 ntBASIC2.1□□□□□ -2.07
VSX2P58304 MIR6132-201ENST00000622083 109 ntBASIC2.1□□□□□ -2.07
VSX2P58304 AC097655.1-201ENST00000635075 318 ntBASIC2.1□□□□□ -2.07
VSX2P58304 CCT4P2-201ENST00000233836 1548 ntBASIC2.1□□□□□ -2.07
VSX2P58304 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VSX2P58304 AC092125.1-201ENST00000562568 1995 ntBASIC2.1□□□□□ -2.07
VSX2P58304 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VSX2P58304 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VSX2P58304 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
VSX2P58304 CKAP2P1-201ENST00000555477 2049 ntBASIC2.09□□□□□ -2.07
VSX2P58304 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VSX2P58304 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VSX2P58304 RNU6-223P-201ENST00000362830 107 ntBASIC2.09□□□□□ -2.07
VSX2P58304 RNU6-925P-201ENST00000384629 104 ntBASIC2.09□□□□□ -2.07
VSX2P58304 MTND1P23-201ENST00000416931 372 ntBASIC2.09□□□□□ -2.07
VSX2P58304 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 BPY2DP-201ENST00000422208 265 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 ELOCP14-201ENST00000428070 331 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC244035.1-201ENST00000430042 390 ntBASIC2.09□□□□□ -2.07
VSX2P58304 MTND1P28-201ENST00000435623 950 ntBASIC2.09□□□□□ -2.07
VSX2P58304 RPS15AP5-201ENST00000436276 388 ntBASIC2.09□□□□□ -2.07
VSX2P58304 SNRPEP9-201ENST00000436794 238 ntBASIC2.09□□□□□ -2.07
VSX2P58304 ELOCP7-201ENST00000439968 331 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC096638.1-201ENST00000444678 216 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AL139109.1-201ENST00000455491 297 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.09□□□□□ -2.07
VSX2P58304 snoU13.15-201ENST00000459407 104 ntBASIC2.09□□□□□ -2.07
VSX2P58304 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
VSX2P58304 UBL5P3-201ENST00000475112 231 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC034222.1-201ENST00000494052 532 ntBASIC2.09□□□□□ -2.07
VSX2P58304 RPS27AP10-201ENST00000496103 208 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC105252.1-201ENST00000503089 286 ntBASIC2.09□□□□□ -2.07
VSX2P58304 RNA5SP290-201ENST00000517133 127 ntBASIC2.09□□□□□ -2.07
VSX2P58304 RNA5SP291-201ENST00000517222 105 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC022634.1-201ENST00000520765 532 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AP000889.2-201ENST00000532684 490 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AP000873.5-201ENST00000533906 236 ntBASIC2.09□□□□□ -2.07
VSX2P58304 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.09□□□□□ -2.07
VSX2P58304 AL359212.1-201ENST00000556608 614 ntBASIC2.09□□□□□ -2.07
VSX2P58304 ISCA1P3-201ENST00000577104 373 ntBASIC2.09□□□□□ -2.07
VSX2P58304 LRRC37A5P-203ENST00000580181 585 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC005261.5-201ENST00000596280 355 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 AC007038.2-201ENST00000608095 740 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 AL355472.4-201ENST00000610233 626 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC013562.2-201ENST00000611632 603 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.09□□□□□ -2.07
VSX2P58304 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
VSX2P58304 U2.21-201ENST00000637295 81 ntBASIC2.09□□□□□ -2.07
VSX2P58304 AC007336.1-201ENST00000576365 3828 ntBASIC2.09□□□□□ -2.08
VSX2P58304 AC022336.2-201ENST00000568966 2538 ntBASIC2.09□□□□□ -2.08
VSX2P58304 AC106754.1-201ENST00000562632 1513 ntBASIC2.08□□□□□ -2.08
VSX2P58304 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
VSX2P58304 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VSX2P58304 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 RNU6-769P-201ENST00000384407 104 ntBASIC2.08□□□□□ -2.08
VSX2P58304 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 MIR888-201ENST00000401186 77 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RN7SKP32-201ENST00000410167 303 ntBASIC2.08□□□□□ -2.08
VSX2P58304 AC106883.1-201ENST00000418805 562 ntBASIC2.08□□□□□ -2.08
VSX2P58304 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 AC098614.2-201ENST00000426040 255 ntBASIC2.08□□□□□ -2.08
VSX2P58304 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.08□□□□□ -2.08
VSX2P58304 USP12PX-201ENST00000432383 1057 ntBASIC2.08□□□□□ -2.08
VSX2P58304 AC084290.1-201ENST00000434995 374 ntBASIC2.08□□□□□ -2.08
VSX2P58304 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.08□□□□□ -2.08
VSX2P58304 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.08□□□□□ -2.08
VSX2P58304 ELOCP30-201ENST00000447108 299 ntBASIC2.08□□□□□ -2.08
VSX2P58304 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.08□□□□□ -2.08
VSX2P58304 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
VSX2P58304 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.08□□□□□ -2.08
VSX2P58304 RPL26P9-201ENST00000457466 433 ntBASIC2.08□□□□□ -2.08
VSX2P58304 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.08□□□□□ -2.08
VSX2P58304 AL121769.1-201ENST00000469473 401 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RPL9P6-201ENST00000492764 598 ntBASIC2.08□□□□□ -2.08
VSX2P58304 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VSX2P58304 AC098591.2-201ENST00000510152 315 ntBASIC2.08□□□□□ -2.08
VSX2P58304 MTND5P13-201ENST00000513046 1079 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RNU6-927P-201ENST00000516199 100 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RNU6-64P-201ENST00000517119 105 ntBASIC2.08□□□□□ -2.08
VSX2P58304 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
VSX2P58304 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VSX2P58304 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.08□□□□□ -2.08
VSX2P58304 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms