Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN6P56747 MTND1P28-201ENST00000435623 950 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 ELOCP7-201ENST00000439968 331 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.04□□□□□ -2.08
CLDN6P56747 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN6P56747 PAXBP1P1-201ENST00000449315 447 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 ZNF886P-201ENST00000450781 723 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 AC011753.1-201ENST00000451001 220 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 MTATP6P7-201ENST00000453315 681 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 CECR9-201ENST00000453421 199 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN6P56747 MRPL42P6-201ENST00000486397 371 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 RNU6-276P-201ENST00000516114 96 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 SNORA19.3-201ENST00000516165 130 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 RNU6-927P-201ENST00000516199 100 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN6P56747 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN6P56747 AC023538.1-201ENST00000534576 736 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 NACAP3-201ENST00000552100 481 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN6P56747 AL606834.3-201ENST00000602615 496 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 AC008121.1-201ENST00000603244 268 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 DDX43P2-201ENST00000604753 1354 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 AC006270.3-201ENST00000605967 1036 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CLDN6P56747 MIR7157-201ENST00000635801 60 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN6P56747 LINC02211-204ENST00000642024 1070 ntBASIC2.04□□□□□ -2.08
CLDN6P56747 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CLDN6P56747 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLDN6P56747 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLDN6P56747 RNU6-778P-201ENST00000363269 103 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 RNU6-560P-201ENST00000364007 108 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 Y_RNA.226-201ENST00000364337 114 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 Y_RNA.311-201ENST00000365068 96 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN6P56747 SNORD116-12-201ENST00000384468 92 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AC007560.1-201ENST00000426912 237 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN6P56747 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN6P56747 DYNLL1P5-201ENST00000467158 270 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 LTV1P1-201ENST00000510683 1237 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AC108729.3-201ENST00000513484 108 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 SCARNA3-201ENST00000517097 143 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN6P56747 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN6P56747 MYL12BP1-201ENST00000569826 507 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AC060771.1-201ENST00000582031 164 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN6P56747 BNIP3P8-201ENST00000597863 560 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AL391813.1-201ENST00000603098 260 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 AC131235.4-201ENST00000609288 620 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 PART1_2.1-201ENST00000612397 250 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN6P56747 U2.21-201ENST00000637295 81 ntBASIC2.03□□□□□ -2.08
CLDN6P56747 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN6P56747 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN6P56747 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CLDN6P56747 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN6P56747 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN6P56747 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 RNU6-777P-201ENST00000364265 104 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 RNU6-853P-201ENST00000364306 107 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN6P56747 RNU6-413P-201ENST00000384115 107 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 RNU6-1257P-201ENST00000384625 110 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 RPL26P27-201ENST00000414397 437 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN6P56747 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN6P56747 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN6P56747 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN6P56747 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN6P56747 ATP5F1P1-201ENST00000433775 569 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 EEF1E1P1-201ENST00000446998 430 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AC020550.1-201ENST00000447385 163 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN6P56747 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN6P56747 GZMAP1-201ENST00000503054 631 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN6P56747 RNA5SP165-201ENST00000517142 115 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AP005902.1-201ENST00000521358 186 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AC118942.1-201ENST00000529674 1035 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN6P56747 AC009127.3-201ENST00000570531 403 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 UBE2L4-201ENST00000587688 464 ntBASIC2.02□□□□□ -2.09
CLDN6P56747 AL121652.1-201ENST00000608851 448 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms