Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RPL30P5-201ENST00000494923 336 ntBASIC2.75□□□□□ -1.97
PEX3P56589 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.75□□□□□ -1.97
PEX3P56589 RNU6-1256P-201ENST00000516539 103 ntBASIC2.75□□□□□ -1.97
PEX3P56589 RNU2-46P-201ENST00000517038 113 ntBASIC2.75□□□□□ -1.97
PEX3P56589 RPL7P20-201ENST00000520308 745 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC022690.1-201ENST00000526681 550 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC124947.2-202ENST00000552735 133 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AF038458.1-201ENST00000588406 262 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.75□□□□□ -1.97
PEX3P56589 RSL24D1P11-201ENST00000591045 491 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AP000860.1-201ENST00000605250 559 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC121334.2-201ENST00000605387 271 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC087752.4-201ENST00000605911 462 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC090970.3-201ENST00000612566 866 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC009090.3-201ENST00000616553 565 ntBASIC2.75□□□□□ -1.97
PEX3P56589 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.75□□□□□ -1.97
PEX3P56589 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PEX3P56589 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
PEX3P56589 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PEX3P56589 TEX21P-201ENST00000447107 1476 ntBASIC2.74□□□□□ -1.97
PEX3P56589 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PEX3P56589 RNU5E-1-201ENST00000362477 120 ntBASIC2.74□□□□□ -1.97
PEX3P56589 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
PEX3P56589 RNY3P13-201ENST00000365542 102 ntBASIC2.74□□□□□ -1.97
PEX3P56589 Y_RNA.553-201ENST00000384670 102 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AL139397.2-201ENST00000404529 772 ntBASIC2.74□□□□□ -1.97
PEX3P56589 FCF1P10-201ENST00000407590 479 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC009963.1-201ENST00000417265 157 ntBASIC2.74□□□□□ -1.97
PEX3P56589 SEPT2P1-201ENST00000419651 180 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.74□□□□□ -1.97
PEX3P56589 USP12PX-201ENST00000432383 1057 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.74□□□□□ -1.97
PEX3P56589 MTCO2P18-201ENST00000457151 658 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.74□□□□□ -1.97
PEX3P56589 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 RNA5SP310-201ENST00000459084 116 ntBASIC2.74□□□□□ -1.97
PEX3P56589 RPS20P20-201ENST00000460498 340 ntBASIC2.74□□□□□ -1.97
PEX3P56589 MTCO2P29-201ENST00000465212 189 ntBASIC2.74□□□□□ -1.97
PEX3P56589 RPS20P22-201ENST00000473700 357 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC091965.2-201ENST00000512324 613 ntBASIC2.74□□□□□ -1.97
PEX3P56589 MTND5P13-201ENST00000513046 1079 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 SNORA31.3-201ENST00000516029 96 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.74□□□□□ -1.97
PEX3P56589 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.74□□□□□ -1.97
PEX3P56589 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 BNIP3P8-201ENST00000597863 560 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC007621.1-201ENST00000604544 437 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC245008.1-201ENST00000608123 476 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC108479.2-201ENST00000617314 601 ntBASIC2.74□□□□□ -1.97
PEX3P56589 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.74□□□□□ -1.97
PEX3P56589 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PEX3P56589 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PEX3P56589 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.73□□□□□ -1.97
PEX3P56589 MIR449A-201ENST00000362113 91 ntBASIC2.73□□□□□ -1.97
PEX3P56589 RNA5SP456-201ENST00000364002 114 ntBASIC2.73□□□□□ -1.97
PEX3P56589 RNU6-348P-201ENST00000384386 107 ntBASIC2.73□□□□□ -1.97
PEX3P56589 SNORA40.3-201ENST00000390964 122 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AL513331.1-201ENST00000411908 397 ntBASIC2.73□□□□□ -1.97
PEX3P56589 ZNF90P2-204ENST00000419323 1075 ntBASIC2.73□□□□□ -1.97
PEX3P56589 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.73□□□□□ -1.97
PEX3P56589 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.73□□□□□ -1.97
PEX3P56589 FCF1P1-201ENST00000432690 571 ntBASIC2.73□□□□□ -1.97
PEX3P56589 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.73□□□□□ -1.97
PEX3P56589 MTCO1P19-201ENST00000443487 500 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 CBWD4P-201ENST00000445695 655 ntBASIC2.73□□□□□ -1.97
PEX3P56589 SSXP1-201ENST00000453640 473 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 RPL23AP45-201ENST00000476406 468 ntBASIC2.73□□□□□ -1.97
PEX3P56589 LARP1BP2-201ENST00000486594 519 ntBASIC2.73□□□□□ -1.97
PEX3P56589 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 AC010424.1-201ENST00000506336 297 ntBASIC2.73□□□□□ -1.97
PEX3P56589 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PEX3P56589 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.73□□□□□ -1.97
PEX3P56589 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 Y_RNA.672-201ENST00000516289 104 ntBASIC2.73□□□□□ -1.97
PEX3P56589 RNA5SP337-201ENST00000517007 109 ntBASIC2.73□□□□□ -1.97
PEX3P56589 RN7SKP258-201ENST00000517151 304 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.73□□□□□ -1.97
PEX3P56589 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.73□□□□□ -1.97
PEX3P56589 ARL2BPP2-201ENST00000550907 489 ntBASIC2.73□□□□□ -1.97
PEX3P56589 RPL23AP84-201ENST00000571193 464 ntBASIC2.73□□□□□ -1.97
PEX3P56589 NBR2-204ENST00000587322 63 ntBASIC2.73□□□□□ -1.97
PEX3P56589 HSPE1P7-201ENST00000604681 321 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AC008962.1-201ENST00000605729 304 ntBASIC2.73□□□□□ -1.97
PEX3P56589 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AC048344.4-201ENST00000619744 527 ntBASIC2.73□□□□□ -1.97
PEX3P56589 AP003399.1-201ENST00000637534 361 ntBASIC2.73□□□□□ -1.97
PEX3P56589 CUL1P1-201ENST00000509510 2425 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms