Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SNORA48.11-201ENST00000517015 89 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 NRON-201ENST00000517270 370 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
FOXA3P55318 AC034114.1-201ENST00000520293 285 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 RANP3-201ENST00000530970 276 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.09□□□□□ -2.23
FOXA3P55318 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.09□□□□□ -2.23
FOXA3P55318 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.09□□□□□ -2.23
FOXA3P55318 AC091152.3-201ENST00000604227 325 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 AP003973.1-201ENST00000604639 691 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 BX248123.2-201ENST00000606318 124 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 AC239868.4-201ENST00000608318 671 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 AL603758.1-201ENST00000618654 241 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 AC006213.5-201ENST00000619673 288 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 AC092192.1-201ENST00000633154 1018 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 U2.21-201ENST00000637295 81 ntBASIC1.09□□□□□ -2.23
FOXA3P55318 MTCO1P9-201ENST00000505577 1534 ntBASIC1.09□□□□□ -2.24
FOXA3P55318 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.08□□□□□ -2.24
FOXA3P55318 U8.1-201ENST00000362843 134 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
FOXA3P55318 RNU6-657P-201ENST00000383904 107 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 MIR504-201ENST00000385065 83 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 MIR758-201ENST00000390227 88 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 CCNG1P1-201ENST00000406783 885 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 MIR1323-201ENST00000408090 73 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 RNU2-28P-201ENST00000410457 189 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 USP9YP6-201ENST00000413550 854 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AL136133.1-201ENST00000413694 376 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 RPL26P27-201ENST00000414397 437 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 BTF3P8-201ENST00000414577 526 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 AC092634.6-201ENST00000418558 192 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AL160275.3-201ENST00000423876 471 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 RAC1P8-201ENST00000427086 527 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 SDAD1P3-201ENST00000427380 333 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.08□□□□□ -2.24
FOXA3P55318 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.08□□□□□ -2.24
FOXA3P55318 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 AC093801.2-201ENST00000503966 1050 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.08□□□□□ -2.24
FOXA3P55318 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.08□□□□□ -2.24
FOXA3P55318 AK6P1-201ENST00000540219 478 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.08□□□□□ -2.24
FOXA3P55318 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
FOXA3P55318 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
FOXA3P55318 AL357094.1-201ENST00000603845 844 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 PRR13P7-201ENST00000605538 430 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.08□□□□□ -2.24
FOXA3P55318 AC009318.2-201ENST00000610917 651 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXA3P55318 AC080188.3-201ENST00000624842 748 ntBASIC1.08□□□□□ -2.24
FOXA3P55318 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
FOXA3P55318 RNU6-778P-201ENST00000363269 103 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
FOXA3P55318 MIR561-201ENST00000385216 97 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 RNU6-796P-201ENST00000391086 107 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXA3P55318 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXA3P55318 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
FOXA3P55318 SKA2P1-201ENST00000425592 390 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 SNRPEP9-201ENST00000436794 238 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AP000949.1-201ENST00000438328 629 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AL161651.1-201ENST00000440882 223 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AL161788.1-201ENST00000441805 169 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 MTND2P6-201ENST00000455337 1030 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AP001324.2-201ENST00000461163 319 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 UBE2DNL-203ENST00000474922 222 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC068587.2-201ENST00000478386 781 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXA3P55318 AC118282.2-201ENST00000508739 374 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 RNU6-362P-201ENST00000516736 90 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 RNU6-528P-201ENST00000516926 100 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 RNU6-840P-201ENST00000517275 65 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.07□□□□□ -2.24
FOXA3P55318 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXA3P55318 AC006199.1-201ENST00000548728 219 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC090502.2-201ENST00000549267 280 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 IMMP1LP2-201ENST00000552954 492 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.07□□□□□ -2.24
FOXA3P55318 AC008269.2-201ENST00000561915 1105 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC233266.2-201ENST00000567067 528 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC005951.2-201ENST00000576282 495 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
FOXA3P55318 AC002545.1-201ENST00000592511 181 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC005261.5-201ENST00000596280 355 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 AC108479.2-201ENST00000617314 601 ntBASIC1.07□□□□□ -2.24
FOXA3P55318 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.07□□□□□ -2.24
FOXA3P55318 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
FOXA3P55318 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
FOXA3P55318 Y_RNA.111-201ENST00000363248 100 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 RNU5E-8P-201ENST00000363502 116 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 MIR150-201ENST00000385048 84 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 MIR30A-201ENST00000385092 71 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 RNA5SP465-201ENST00000391195 109 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AL627390.1-201ENST00000396055 340 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 RNU4-26P-201ENST00000410270 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms