Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL139039.1-201ENST00000401900 692 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RNU2-37P-201ENST00000410695 177 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RNA5SP111-201ENST00000411386 101 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RNU2-71P-201ENST00000411395 189 ntBASIC3.21□□□□□ -1.9
CDH12P55289 EEF1A1P40-201ENST00000412883 573 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH12P55289 DBIP2-201ENST00000419076 262 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AL160275.3-201ENST00000423876 471 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AC012498.1-201ENST00000424037 437 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AL451062.2-201ENST00000427515 271 ntBASIC3.21□□□□□ -1.9
CDH12P55289 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 AC091390.1-201ENST00000433904 331 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 RPS15AP27-201ENST00000449183 343 ntBASIC3.21□□□□□ -1.9
CDH12P55289 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH12P55289 AL590639.1-201ENST00000456484 337 ntBASIC3.21□□□□□ -1.9
CDH12P55289 SCARNA18-201ENST00000459004 134 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RPL23AP67-201ENST00000465341 474 ntBASIC3.21□□□□□ -1.9
CDH12P55289 HMGN1P11-201ENST00000508668 303 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 APOOP4-201ENST00000513530 597 ntBASIC3.21□□□□□ -1.9
CDH12P55289 LRRC34P2-201ENST00000514850 553 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RNU2-58P-201ENST00000516403 183 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RNU6-914P-201ENST00000516749 109 ntBASIC3.21□□□□□ -1.9
CDH12P55289 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.21□□□□□ -1.9
CDH12P55289 AC107953.1-201ENST00000522216 297 ntBASIC3.21□□□□□ -1.9
CDH12P55289 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH12P55289 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH12P55289 MIR3186-201ENST00000577404 85 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AC098826.3-201ENST00000603823 466 ntBASIC3.21□□□□□ -1.9
CDH12P55289 AL138889.2-201ENST00000603883 242 ntBASIC3.21□□□□□ -1.9
CDH12P55289 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH12P55289 U4.6-201ENST00000621618 127 ntBASIC3.21□□□□□ -1.9
CDH12P55289 U6.98-201ENST00000637157 84 ntBASIC3.21□□□□□ -1.9
CDH12P55289 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH12P55289 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CDH12P55289 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH12P55289 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH12P55289 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
CDH12P55289 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH12P55289 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH12P55289 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH12P55289 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH12P55289 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH12P55289 RNU6-1167P-201ENST00000363227 94 ntBASIC3.2□□□□□ -1.9
CDH12P55289 RNU6-512P-201ENST00000364438 103 ntBASIC3.2□□□□□ -1.9
CDH12P55289 RNU6-767P-201ENST00000384132 107 ntBASIC3.2□□□□□ -1.9
CDH12P55289 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
CDH12P55289 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH12P55289 AL592114.1-201ENST00000403842 483 ntBASIC3.2□□□□□ -1.9
CDH12P55289 U3.42-201ENST00000408746 214 ntBASIC3.2□□□□□ -1.9
CDH12P55289 RNA5SP129-201ENST00000410276 118 ntBASIC3.2□□□□□ -1.9
CDH12P55289 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.2□□□□□ -1.9
CDH12P55289 ATP5A1P2-201ENST00000412323 255 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH12P55289 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AC017079.2-201ENST00000416102 485 ntBASIC3.2□□□□□ -1.9
CDH12P55289 BX842559.1-201ENST00000419615 532 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AL645937.1-202ENST00000421799 937 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH12P55289 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH12P55289 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH12P55289 RPS24P13-201ENST00000442520 397 ntBASIC3.2□□□□□ -1.9
CDH12P55289 RPS20P22-201ENST00000473700 357 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AC021205.2-201ENST00000480069 347 ntBASIC3.2□□□□□ -1.9
CDH12P55289 RPL21P93-201ENST00000480465 489 ntBASIC3.2□□□□□ -1.9
CDH12P55289 SUMO2P6-201ENST00000505273 288 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AC009901.1-201ENST00000506703 541 ntBASIC3.2□□□□□ -1.9
CDH12P55289 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH12P55289 AC112206.3-201ENST00000514578 389 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH12P55289 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH12P55289 RNU6-1314P-201ENST00000517139 104 ntBASIC3.2□□□□□ -1.9
CDH12P55289 BTF3P12-201ENST00000519620 469 ntBASIC3.2□□□□□ -1.9
CDH12P55289 RPL7P20-201ENST00000520308 745 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH12P55289 VN1R85P-201ENST00000601587 426 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AL161798.1-201ENST00000604630 131 ntBASIC3.2□□□□□ -1.9
CDH12P55289 AC063943.3-201ENST00000615562 356 ntBASIC3.2□□□□□ -1.9
CDH12P55289 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH12P55289 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH12P55289 RNU6-845P-201ENST00000362578 103 ntBASIC3.19□□□□□ -1.9
CDH12P55289 DEFB109C-201ENST00000382575 264 ntBASIC3.19□□□□□ -1.9
CDH12P55289 DEFB109B-201ENST00000382656 264 ntBASIC3.19□□□□□ -1.9
CDH12P55289 MIR493-201ENST00000385254 89 ntBASIC3.19□□□□□ -1.9
CDH12P55289 MIR1290-201ENST00000408735 78 ntBASIC3.19□□□□□ -1.9
CDH12P55289 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH12P55289 RNU4-26P-201ENST00000410270 107 ntBASIC3.19□□□□□ -1.9
CDH12P55289 RNU2-41P-201ENST00000410991 178 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AC080125.1-201ENST00000414888 684 ntBASIC3.19□□□□□ -1.9
CDH12P55289 AL356968.1-201ENST00000416622 474 ntBASIC3.19□□□□□ -1.9
CDH12P55289 PDCL2P1-201ENST00000419302 352 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms