Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1H2P55055 ZNF680P1-201ENST00000436625 1469 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H2P55055 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NR1H2P55055 RNU6-1085P-201ENST00000363576 107 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 Y_RNA.381-201ENST00000365666 102 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NR1H2P55055 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 RPS4XP8-201ENST00000402039 771 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H2P55055 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H2P55055 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H2P55055 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H2P55055 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H2P55055 MTATP6P13-201ENST00000438531 667 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC003071.1-201ENST00000451219 789 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H2P55055 MTATP6P7-201ENST00000453315 681 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H2P55055 AC011352.1-201ENST00000512300 793 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC010265.1-201ENST00000513509 211 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 RNU6-718P-201ENST00000516166 105 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 SNORA70.24-201ENST00000517233 118 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AP001646.1-201ENST00000527936 915 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.35□□□□□ -1.87
NR1H2P55055 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AP001596.2-201ENST00000608410 312 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC096577.2-201ENST00000611455 153 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 AC079684.1-201ENST00000621405 437 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H2P55055 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H2P55055 AC092435.3-201ENST00000565538 3654 ntBASIC3.35□□□□□ -1.87
NR1H2P55055 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H2P55055 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NR1H2P55055 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.35□□□□□ -1.87
NR1H2P55055 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H2P55055 AL079305.1-201ENST00000623159 3008 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.87
NR1H2P55055 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H2P55055 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.34□□□□□ -1.87
NR1H2P55055 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H2P55055 RNU4-12P-201ENST00000365233 139 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H2P55055 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H2P55055 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H2P55055 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 UBE2V1P8-201ENST00000437166 265 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H2P55055 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 AC027673.1-201ENST00000456245 405 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AL133162.1-201ENST00000463228 453 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 MRPS17P3-201ENST00000465453 385 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AC006512.1-201ENST00000468816 291 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AC233702.1-201ENST00000482905 502 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AF213884.2-201ENST00000510417 903 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AC108078.2-201ENST00000510750 236 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 Y_RNA.689-201ENST00000516589 107 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.34□□□□□ -1.87
NR1H2P55055 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H2P55055 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.34□□□□□ -1.87
NR1H2P55055 MTATP6P3-201ENST00000581686 676 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 MIR5187-201ENST00000583479 76 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H2P55055 AC090517.2-201ENST00000614966 680 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H2P55055 uc_338.11-201ENST00000619132 160 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AC093648.1-201ENST00000623546 606 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 AL512643.1-201ENST00000635735 524 ntBASIC3.34□□□□□ -1.87
NR1H2P55055 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H2P55055 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
NR1H2P55055 AP003122.5-201ENST00000527668 3766 ntBASIC3.34□□□□□ -1.88
NR1H2P55055 MTCO1P12-201ENST00000414273 1543 ntBASIC3.34□□□□□ -1.88
NR1H2P55055 ELF2P3-201ENST00000445099 1506 ntBASIC3.34□□□□□ -1.88
NR1H2P55055 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H2P55055 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H2P55055 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 RNU1-73P-201ENST00000383971 164 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H2P55055 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H2P55055 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H2P55055 USP9YP18-201ENST00000425912 695 ntBASIC3.33□□□□□ -1.88
NR1H2P55055 MTCO3P30-201ENST00000426425 670 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms