Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA4P54764 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHA4P54764 AC091953.3-201ENST00000623220 236 ntBASIC4.89□□□□□ -1.63
EPHA4P54764 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.89□□□□□ -1.63
EPHA4P54764 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA4P54764 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
EPHA4P54764 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
EPHA4P54764 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHA4P54764 AL353743.1-202ENST00000431724 1695 ntBASIC4.89□□□□□ -1.63
EPHA4P54764 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHA4P54764 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA4P54764 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA4P54764 MAPK10-263ENST00000641052 4307 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
EPHA4P54764 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA4P54764 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHA4P54764 SNORA25.1-201ENST00000362326 128 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 RNU6-1286P-201ENST00000383871 107 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 RNU6-541P-201ENST00000384709 110 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 MIR32-201ENST00000384965 70 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 U3.37-201ENST00000408528 213 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 Y_RNA.626-201ENST00000411288 95 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA4P54764 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA4P54764 COX6CP13-201ENST00000428703 226 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA4P54764 SNRPEP9-201ENST00000436794 238 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 AC005002.2-201ENST00000438228 269 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 RPS29P9-201ENST00000440360 171 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHA4P54764 AC109925.1-201ENST00000478069 331 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 RN7SL441P-201ENST00000492388 296 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 RNU6-1114P-201ENST00000516022 107 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA4P54764 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHA4P54764 AC233702.9-201ENST00000581528 203 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 AC087783.2-201ENST00000605070 562 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 BRDTP1-201ENST00000605735 677 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 RPL23AP88-201ENST00000605759 454 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 AC090132.2-201ENST00000615881 347 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
EPHA4P54764 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
EPHA4P54764 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
EPHA4P54764 AC008568.2-201ENST00000623862 2313 ntBASIC4.88□□□□□ -1.63
EPHA4P54764 ZNF826P-207ENST00000622273 1910 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EPHA4P54764 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 SDAD1P1-202ENST00000524156 2051 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
EPHA4P54764 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 Y_RNA.76-201ENST00000362931 109 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 Y_RNA.291-201ENST00000364886 113 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 RNA5SP240-201ENST00000365355 128 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
EPHA4P54764 Y_RNA.590-201ENST00000410140 107 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 AL049745.1-201ENST00000433953 286 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 AC112498.1-201ENST00000444401 332 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 snoU13.24-201ENST00000458998 104 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 HMGB3P16-201ENST00000508037 287 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 RNU6-861P-201ENST00000516745 106 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.87□□□□□ -1.63
EPHA4P54764 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.87□□□□□ -1.63
EPHA4P54764 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.87□□□□□ -1.63
EPHA4P54764 AC010928.2-201ENST00000588017 287 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.87□□□□□ -1.63
EPHA4P54764 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
EPHA4P54764 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
EPHA4P54764 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
EPHA4P54764 AC083843.3-201ENST00000623679 2186 ntBASIC4.87□□□□□ -1.63
EPHA4P54764 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
EPHA4P54764 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.86□□□□□ -1.63
EPHA4P54764 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
EPHA4P54764 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHA4P54764 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
EPHA4P54764 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EPHA4P54764 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHA4P54764 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EPHA4P54764 RNU6-858P-201ENST00000362436 107 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 RNU6-1159P-201ENST00000362933 107 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 RNU6-682P-201ENST00000363843 106 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 RNU6-142P-201ENST00000384019 107 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 Y_RNA.569-201ENST00000384749 103 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
EPHA4P54764 RNU1-139P-201ENST00000391307 165 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EPHA4P54764 RPS4XP3-201ENST00000398541 413 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 SNORA77-201ENST00000408716 125 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 RNU6-1140P-201ENST00000410517 106 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 AC011742.1-201ENST00000431448 434 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 BX323845.1-201ENST00000432417 179 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 Z82210.1-201ENST00000440037 231 ntBASIC4.86□□□□□ -1.63
EPHA4P54764 AC098831.1-201ENST00000440661 216 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms