Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 BNIP3P6-201ENST00000549284 499 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.67□□□□□ -1.82
COPB1P53618 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AF038458.1-201ENST00000588406 262 ntBASIC3.67□□□□□ -1.82
COPB1P53618 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.67□□□□□ -1.82
COPB1P53618 AC006557.5-201ENST00000603126 811 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.6-201ENST00000603753 252 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.11-201ENST00000604059 253 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC008162.1-201ENST00000604718 254 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.1-201ENST00000604752 252 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC007179.3-201ENST00000604976 235 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.5-201ENST00000605253 252 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.12-201ENST00000605291 253 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.8-201ENST00000605353 252 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL670379.7-201ENST00000605823 252 ntBASIC3.67□□□□□ -1.82
COPB1P53618 U1.23-201ENST00000610293 146 ntBASIC3.67□□□□□ -1.82
COPB1P53618 MIR7851-201ENST00000610611 160 ntBASIC3.67□□□□□ -1.82
COPB1P53618 RNU1-68P-201ENST00000615382 146 ntBASIC3.67□□□□□ -1.82
COPB1P53618 uc_338.11-201ENST00000619132 160 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC015967.1-201ENST00000619893 476 ntBASIC3.67□□□□□ -1.82
COPB1P53618 U1.39-201ENST00000621562 146 ntBASIC3.67□□□□□ -1.82
COPB1P53618 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.67□□□□□ -1.82
COPB1P53618 AC073476.4-201ENST00000628409 72 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC112487.2-201ENST00000637950 304 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL365440.1-201ENST00000436135 2167 ntBASIC3.67□□□□□ -1.82
COPB1P53618 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
COPB1P53618 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPB1P53618 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPB1P53618 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPB1P53618 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPB1P53618 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COPB1P53618 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COPB1P53618 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COPB1P53618 RNU6-522P-201ENST00000364497 107 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COPB1P53618 RNU6-76P-201ENST00000384060 104 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AL645937.1-202ENST00000421799 937 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.66□□□□□ -1.82
COPB1P53618 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 HMGN2P31-201ENST00000432430 273 ntBASIC3.66□□□□□ -1.82
COPB1P53618 TAAR7P-201ENST00000436141 242 ntBASIC3.66□□□□□ -1.82
COPB1P53618 RPL23AP22-201ENST00000437556 453 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.66□□□□□ -1.82
COPB1P53618 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
COPB1P53618 RPL23AP11-201ENST00000475260 469 ntBASIC3.66□□□□□ -1.82
COPB1P53618 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 AC091885.1-201ENST00000506658 268 ntBASIC3.66□□□□□ -1.82
COPB1P53618 RNU6-1314P-201ENST00000517139 104 ntBASIC3.66□□□□□ -1.82
COPB1P53618 IGKV2-26-201ENST00000518305 343 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 AC107953.1-201ENST00000522216 297 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AP006587.4-201ENST00000526053 529 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 GLYCAM1-201ENST00000546596 285 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AC093012.1-202ENST00000549403 582 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.66□□□□□ -1.82
COPB1P53618 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.66□□□□□ -1.82
COPB1P53618 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.66□□□□□ -1.82
COPB1P53618 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.66□□□□□ -1.82
COPB1P53618 VN1R80P-201ENST00000597126 338 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AL022099.1-201ENST00000604551 712 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AC087045.1-201ENST00000605856 382 ntBASIC3.66□□□□□ -1.82
COPB1P53618 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
COPB1P53618 AC009248.2-201ENST00000619826 254 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
COPB1P53618 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.66□□□□□ -1.82
COPB1P53618 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COPB1P53618 API5P2-201ENST00000397055 1498 ntBASIC3.66□□□□□ -1.82
COPB1P53618 AP001148.1-201ENST00000624124 2359 ntBASIC3.66□□□□□ -1.82
COPB1P53618 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
COPB1P53618 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.65□□□□□ -1.82
COPB1P53618 AC009812.4-201ENST00000569134 1805 ntBASIC3.65□□□□□ -1.82
COPB1P53618 MTND4P35-201ENST00000604257 1375 ntBASIC3.65□□□□□ -1.82
COPB1P53618 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COPB1P53618 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
COPB1P53618 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COPB1P53618 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
COPB1P53618 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RNA5SP383-201ENST00000362934 120 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RNU4-76P-201ENST00000364509 141 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RNU6-946P-201ENST00000383878 107 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
COPB1P53618 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COPB1P53618 AL356432.1-201ENST00000405809 419 ntBASIC3.65□□□□□ -1.83
COPB1P53618 TXNP7-201ENST00000406296 293 ntBASIC3.65□□□□□ -1.83
COPB1P53618 BX323014.1-201ENST00000412876 237 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.65□□□□□ -1.83
COPB1P53618 MTCO1P39-201ENST00000426148 480 ntBASIC3.65□□□□□ -1.83
COPB1P53618 MTATP6P4-201ENST00000427725 675 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RPL7L1P10-201ENST00000427790 463 ntBASIC3.65□□□□□ -1.83
COPB1P53618 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.65□□□□□ -1.83
COPB1P53618 RPL26P6-201ENST00000440913 438 ntBASIC3.65□□□□□ -1.83
COPB1P53618 RBMY2UP-201ENST00000453474 324 ntBASIC3.65□□□□□ -1.83
COPB1P53618 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.65□□□□□ -1.83
COPB1P53618 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.65□□□□□ -1.83
COPB1P53618 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
COPB1P53618 HMGB1P22-201ENST00000505315 124 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms