Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC060771.1-201ENST00000582031 164 ntBASIC2.3□□□□□ -2.04
ACLYP53396 MTND3P19-201ENST00000603825 345 ntBASIC2.3□□□□□ -2.04
ACLYP53396 AL133445.2-201ENST00000611191 527 ntBASIC2.3□□□□□ -2.04
ACLYP53396 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.3□□□□□ -2.04
ACLYP53396 AL049777.1-201ENST00000622740 518 ntBASIC2.3□□□□□ -2.04
ACLYP53396 PCMTD1P7-201ENST00000634506 357 ntBASIC2.3□□□□□ -2.04
ACLYP53396 AC099654.8-201ENST00000637757 681 ntBASIC2.3□□□□□ -2.04
ACLYP53396 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ACLYP53396 Y_RNA.245-201ENST00000364493 95 ntBASIC2.29□□□□□ -2.04
ACLYP53396 SNORD116.1-201ENST00000365628 92 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AL139156.1-201ENST00000412785 841 ntBASIC2.29□□□□□ -2.04
ACLYP53396 RPL23AP36-201ENST00000413895 458 ntBASIC2.29□□□□□ -2.04
ACLYP53396 SEPT2P1-201ENST00000419651 180 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC005005.2-201ENST00000420779 380 ntBASIC2.29□□□□□ -2.04
ACLYP53396 USP9YP26-201ENST00000421008 661 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.29□□□□□ -2.04
ACLYP53396 MED14P1-201ENST00000430517 648 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC010153.1-201ENST00000432862 727 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.29□□□□□ -2.04
ACLYP53396 OSTCP8-201ENST00000445117 448 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.29□□□□□ -2.04
ACLYP53396 COX6CP12-201ENST00000446748 202 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC020550.1-201ENST00000447385 163 ntBASIC2.29□□□□□ -2.04
ACLYP53396 MTCO1P27-201ENST00000448269 226 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AP000542.1-201ENST00000448473 371 ntBASIC2.29□□□□□ -2.04
ACLYP53396 FABP5P13-201ENST00000452144 328 ntBASIC2.29□□□□□ -2.04
ACLYP53396 RN7SKP210-201ENST00000459176 261 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.29□□□□□ -2.04
ACLYP53396 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
ACLYP53396 AC022447.1-201ENST00000515358 464 ntBASIC2.29□□□□□ -2.04
ACLYP53396 RNU6-927P-201ENST00000516199 100 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
ACLYP53396 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.29□□□□□ -2.04
ACLYP53396 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.29□□□□□ -2.04
ACLYP53396 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ACLYP53396 PRELID2P1-201ENST00000552837 301 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.29□□□□□ -2.04
ACLYP53396 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.29□□□□□ -2.04
ACLYP53396 MIR4446-201ENST00000578505 67 ntBASIC2.29□□□□□ -2.04
ACLYP53396 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AF129408.1-201ENST00000608767 431 ntBASIC2.29□□□□□ -2.04
ACLYP53396 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
ACLYP53396 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ACLYP53396 AC010329.5-201ENST00000623497 2174 ntBASIC2.29□□□□□ -2.04
ACLYP53396 AC110491.1-201ENST00000562191 2010 ntBASIC2.29□□□□□ -2.04
ACLYP53396 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACLYP53396 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACLYP53396 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACLYP53396 SNORA40.18-201ENST00000391200 128 ntBASIC2.28□□□□□ -2.04
ACLYP53396 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
ACLYP53396 RNU6-1328P-201ENST00000410938 106 ntBASIC2.28□□□□□ -2.04
ACLYP53396 RNU4-22P-201ENST00000411058 166 ntBASIC2.28□□□□□ -2.04
ACLYP53396 MTCO1P17-201ENST00000411522 491 ntBASIC2.28□□□□□ -2.04
ACLYP53396 NDUFS5P4-201ENST00000412983 318 ntBASIC2.28□□□□□ -2.04
ACLYP53396 BTF3L4P3-201ENST00000418879 476 ntBASIC2.28□□□□□ -2.04
ACLYP53396 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.28□□□□□ -2.04
ACLYP53396 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.28□□□□□ -2.04
ACLYP53396 HMGB1P9-201ENST00000429856 646 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AL592045.1-201ENST00000429867 352 ntBASIC2.28□□□□□ -2.04
ACLYP53396 USP12PX-201ENST00000432383 1057 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.28□□□□□ -2.04
ACLYP53396 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.28□□□□□ -2.04
ACLYP53396 AC005410.1-202ENST00000460347 485 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AP000852.1-201ENST00000472460 573 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.28□□□□□ -2.04
ACLYP53396 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.28□□□□□ -2.04
ACLYP53396 AC112206.4-201ENST00000515142 405 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.28□□□□□ -2.04
ACLYP53396 RNA5SP182-201ENST00000516064 82 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.28□□□□□ -2.04
ACLYP53396 AP000889.2-201ENST00000532684 490 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC023813.2-201ENST00000564321 469 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACLYP53396 MIR4498-201ENST00000577599 66 ntBASIC2.28□□□□□ -2.04
ACLYP53396 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.28□□□□□ -2.04
ACLYP53396 AL596327.1-201ENST00000603629 213 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC004805.2-201ENST00000605382 482 ntBASIC2.28□□□□□ -2.04
ACLYP53396 OR10AB1P-201ENST00000609613 938 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AL589743.7-201ENST00000612637 233 ntBASIC2.28□□□□□ -2.04
ACLYP53396 AC006386.1-201ENST00000619436 415 ntBASIC2.28□□□□□ -2.04
ACLYP53396 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
ACLYP53396 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.05
ACLYP53396 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACLYP53396 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
ACLYP53396 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.27□□□□□ -2.05
ACLYP53396 AC004520.1-201ENST00000608362 1413 ntBASIC2.27□□□□□ -2.05
ACLYP53396 MTND4P35-201ENST00000604257 1375 ntBASIC2.27□□□□□ -2.05
ACLYP53396 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.27□□□□□ -2.05
ACLYP53396 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
ACLYP53396 RNU6-1083P-201ENST00000384022 107 ntBASIC2.27□□□□□ -2.05
ACLYP53396 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
ACLYP53396 MIR320C1-201ENST00000408566 88 ntBASIC2.27□□□□□ -2.05
ACLYP53396 AF274854.1-201ENST00000413236 615 ntBASIC2.27□□□□□ -2.05
ACLYP53396 HMGB1P11-201ENST00000413899 637 ntBASIC2.27□□□□□ -2.05
ACLYP53396 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.27□□□□□ -2.05
ACLYP53396 AC083875.1-201ENST00000419509 405 ntBASIC2.27□□□□□ -2.05
ACLYP53396 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.27□□□□□ -2.05
ACLYP53396 MTCO3P30-201ENST00000426425 670 ntBASIC2.27□□□□□ -2.05
ACLYP53396 ELOCP14-201ENST00000428070 331 ntBASIC2.27□□□□□ -2.05
ACLYP53396 MTND1P28-201ENST00000435623 950 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms