Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL512844.2-201ENST00000433990 593 ntBASIC2.95□□□□□ -1.94
PDX1P52945 MTATP6P16-201ENST00000434543 526 ntBASIC2.95□□□□□ -1.94
PDX1P52945 BNIP3P2-201ENST00000441221 577 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.95□□□□□ -1.94
PDX1P52945 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.95□□□□□ -1.94
PDX1P52945 AC013267.1-201ENST00000458227 267 ntBASIC2.95□□□□□ -1.94
PDX1P52945 RNU6-410P-201ENST00000517006 107 ntBASIC2.95□□□□□ -1.94
PDX1P52945 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.95□□□□□ -1.94
PDX1P52945 AP001646.1-201ENST00000527936 915 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.95□□□□□ -1.94
PDX1P52945 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.95□□□□□ -1.94
PDX1P52945 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.95□□□□□ -1.94
PDX1P52945 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.95□□□□□ -1.94
PDX1P52945 GTF3AP2-201ENST00000557014 266 ntBASIC2.95□□□□□ -1.94
PDX1P52945 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.95□□□□□ -1.94
PDX1P52945 AC024619.4-201ENST00000580924 316 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AC098848.2-201ENST00000588023 330 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.95□□□□□ -1.94
PDX1P52945 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.95□□□□□ -1.94
PDX1P52945 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PDX1P52945 AC002076.2-201ENST00000617362 122 ntBASIC2.95□□□□□ -1.94
PDX1P52945 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.95□□□□□ -1.94
PDX1P52945 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.95□□□□□ -1.94
PDX1P52945 AC093648.1-201ENST00000623546 606 ntBASIC2.95□□□□□ -1.94
PDX1P52945 MTND5P29-201ENST00000458676 1807 ntBASIC2.95□□□□□ -1.94
PDX1P52945 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDX1P52945 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
PDX1P52945 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
PDX1P52945 AC068050.1-201ENST00000394891 380 ntBASIC2.94□□□□□ -1.94
PDX1P52945 AC114491.1-201ENST00000416095 246 ntBASIC2.94□□□□□ -1.94
PDX1P52945 MTCO1P21-201ENST00000416634 589 ntBASIC2.94□□□□□ -1.94
PDX1P52945 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 MTCO2P19-201ENST00000427513 598 ntBASIC2.94□□□□□ -1.94
PDX1P52945 Z82210.1-201ENST00000440037 231 ntBASIC2.94□□□□□ -1.94
PDX1P52945 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.94□□□□□ -1.94
PDX1P52945 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.94□□□□□ -1.94
PDX1P52945 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 RN7SL429P-201ENST00000479090 223 ntBASIC2.94□□□□□ -1.94
PDX1P52945 RN7SL489P-201ENST00000486185 223 ntBASIC2.94□□□□□ -1.94
PDX1P52945 RN7SL327P-201ENST00000488659 223 ntBASIC2.94□□□□□ -1.94
PDX1P52945 RPL9P6-201ENST00000492764 598 ntBASIC2.94□□□□□ -1.94
PDX1P52945 HMGB1P29-201ENST00000505659 499 ntBASIC2.94□□□□□ -1.94
PDX1P52945 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.94□□□□□ -1.94
PDX1P52945 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
PDX1P52945 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.94□□□□□ -1.94
PDX1P52945 OR5G4P-201ENST00000525251 760 ntBASIC2.94□□□□□ -1.94
PDX1P52945 FAM92A1P1-201ENST00000528023 890 ntBASIC2.94□□□□□ -1.94
PDX1P52945 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.94□□□□□ -1.94
PDX1P52945 AC010546.1-201ENST00000569391 485 ntBASIC2.94□□□□□ -1.94
PDX1P52945 EIF1P4-201ENST00000572664 335 ntBASIC2.94□□□□□ -1.94
PDX1P52945 AC098826.3-201ENST00000603823 466 ntBASIC2.94□□□□□ -1.94
PDX1P52945 HSPE1P7-201ENST00000604681 321 ntBASIC2.94□□□□□ -1.94
PDX1P52945 Z84480.1-201ENST00000605131 311 ntBASIC2.94□□□□□ -1.94
PDX1P52945 AC099778.2-201ENST00000610904 211 ntBASIC2.94□□□□□ -1.94
PDX1P52945 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.94□□□□□ -1.94
PDX1P52945 RN7SL853P-201ENST00000617250 223 ntBASIC2.94□□□□□ -1.94
PDX1P52945 FRG1KP-201ENST00000623592 341 ntBASIC2.94□□□□□ -1.94
PDX1P52945 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDX1P52945 CUL1P1-201ENST00000509510 2425 ntBASIC2.94□□□□□ -1.94
PDX1P52945 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PDX1P52945 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDX1P52945 AC005183.1-201ENST00000603687 1979 ntBASIC2.94□□□□□ -1.94
PDX1P52945 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDX1P52945 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 AC000403.1-201ENST00000613696 3585 ntBASIC2.94□□□□□ -1.94
PDX1P52945 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PDX1P52945 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
PDX1P52945 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.93□□□□□ -1.94
PDX1P52945 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDX1P52945 AC007256.1-201ENST00000392253 2765 ntBASIC2.93□□□□□ -1.94
PDX1P52945 MIR22-201ENST00000362190 85 ntBASIC2.93□□□□□ -1.94
PDX1P52945 RNU6-288P-201ENST00000363690 104 ntBASIC2.93□□□□□ -1.94
PDX1P52945 MIR591-201ENST00000385290 95 ntBASIC2.93□□□□□ -1.94
PDX1P52945 FAT1P1-201ENST00000406588 507 ntBASIC2.93□□□□□ -1.94
PDX1P52945 RNU2-39P-201ENST00000410604 198 ntBASIC2.93□□□□□ -1.94
PDX1P52945 RNU4-55P-201ENST00000410731 137 ntBASIC2.93□□□□□ -1.94
PDX1P52945 RNA5SP38-201ENST00000410750 119 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PDX1P52945 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PDX1P52945 TMEM167AP1-201ENST00000423409 219 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.93□□□□□ -1.94
PDX1P52945 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 AC073464.1-201ENST00000429823 534 ntBASIC2.93□□□□□ -1.94
PDX1P52945 RPS20P5-201ENST00000434808 360 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.93□□□□□ -1.94
PDX1P52945 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.93□□□□□ -1.94
PDX1P52945 AP002884.2-201ENST00000471647 395 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC117440.1-201ENST00000474107 571 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC012181.1-201ENST00000479895 423 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.93□□□□□ -1.94
PDX1P52945 AC006445.2-201ENST00000510061 472 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms