Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RPL23AP76-201ENST00000441860 458 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR2JP52435 SNORD97-201ENST00000459187 142 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 COX7A2P2-201ENST00000505291 250 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR2JP52435 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.06□□□□□ -2.24
POLR2JP52435 AL132857.1-201ENST00000555180 708 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR2JP52435 AL359212.1-201ENST00000556608 614 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 AC022254.1-201ENST00000567857 235 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
POLR2JP52435 AP003973.1-201ENST00000604639 691 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 PRR13P7-201ENST00000605538 430 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 BX322635.1-201ENST00000605804 496 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR2JP52435 AC090617.9-201ENST00000623751 147 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR2JP52435 Z99571.1-201ENST00000636677 394 ntBASIC1.06□□□□□ -2.24
POLR2JP52435 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
POLR2JP52435 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
POLR2JP52435 MIR26B-201ENST00000362251 77 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RNU6-251P-201ENST00000363235 104 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 SNORA7.1-201ENST00000363750 139 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 SNORA27.3-201ENST00000364937 134 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RNU6-741P-201ENST00000383889 107 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RNA5SP213-201ENST00000391031 106 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 SNORA17.3-201ENST00000391159 129 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
POLR2JP52435 MIR888-201ENST00000401186 77 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 NDUFS5P1-201ENST00000405668 289 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 TXNP7-201ENST00000406296 293 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.05□□□□□ -2.24
POLR2JP52435 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.05□□□□□ -2.24
POLR2JP52435 AC092648.1-201ENST00000425870 423 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.05□□□□□ -2.24
POLR2JP52435 AL121890.1-201ENST00000435457 205 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 MTND6P13-201ENST00000443510 523 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.05□□□□□ -2.24
POLR2JP52435 PTENP1-201ENST00000447117 1215 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.05□□□□□ -2.24
POLR2JP52435 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
POLR2JP52435 RPL31P58-201ENST00000469001 379 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RN7SL429P-201ENST00000479090 223 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RN7SL489P-201ENST00000486185 223 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RN7SL327P-201ENST00000488659 223 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 HMGB1P35-201ENST00000503360 598 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 AC084024.2-201ENST00000503480 791 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 YWHAEP4-201ENST00000505390 198 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
POLR2JP52435 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR2JP52435 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.05□□□□□ -2.24
POLR2JP52435 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
POLR2JP52435 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR2JP52435 SULT1C2P1-202ENST00000562418 459 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
POLR2JP52435 AC007151.1-201ENST00000572774 483 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.05□□□□□ -2.24
POLR2JP52435 AC098826.3-201ENST00000603823 466 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 AC022387.2-201ENST00000604050 448 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 RN7SL853P-201ENST00000617250 223 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 AC073569.3-201ENST00000619055 682 ntBASIC1.05□□□□□ -2.24
POLR2JP52435 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.05□□□□□ -2.24
POLR2JP52435 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
POLR2JP52435 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR2JP52435 RNU6-661P-201ENST00000362409 107 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 MIR518A2-201ENST00000384966 87 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 MIR513A1-201ENST00000385138 129 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 BTF3L4P2-201ENST00000392798 346 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR2JP52435 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
POLR2JP52435 RNU4-62P-201ENST00000410125 130 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
POLR2JP52435 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.04□□□□□ -2.24
POLR2JP52435 AL929288.2-201ENST00000446368 407 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AC009474.2-201ENST00000451383 136 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 HMGN2P23-201ENST00000456759 269 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 ARL2BPP5-201ENST00000523141 481 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.04□□□□□ -2.24
POLR2JP52435 AC025918.2-201ENST00000558683 763 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR2JP52435 AL031274.2-201ENST00000599419 203 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AC136601.2-201ENST00000604356 474 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AP001485.1-201ENST00000604799 199 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 AC007490.1-201ENST00000624321 703 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 LINC02211-204ENST00000642024 1070 ntBASIC1.04□□□□□ -2.24
POLR2JP52435 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR2JP52435 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
POLR2JP52435 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR2JP52435 RNU6-115P-201ENST00000364310 107 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 RNU6-619P-201ENST00000365146 108 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 RNU6-1005P-201ENST00000384519 107 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.03□□□□□ -2.24
POLR2JP52435 RPL30P13-201ENST00000418873 348 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 MTCO1P57-201ENST00000432182 261 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.03□□□□□ -2.24
POLR2JP52435 BX322784.1-201ENST00000455793 1077 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 RNU7-95P-201ENST00000459222 64 ntBASIC1.03□□□□□ -2.24
POLR2JP52435 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.03□□□□□ -2.24
POLR2JP52435 AC114801.2-201ENST00000503825 781 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms