Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.84□□□□□ -1.63
USP11P51784 RNY1P16-201ENST00000363063 111 ntBASIC4.84□□□□□ -1.63
USP11P51784 Y_RNA.416-201ENST00000384014 113 ntBASIC4.84□□□□□ -1.63
USP11P51784 SNORA51.11-201ENST00000384442 131 ntBASIC4.84□□□□□ -1.63
USP11P51784 RPL21P38-201ENST00000418090 167 ntBASIC4.84□□□□□ -1.63
USP11P51784 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.84□□□□□ -1.63
USP11P51784 BX276092.4-201ENST00000452056 248 ntBASIC4.84□□□□□ -1.63
USP11P51784 RPL7P5-201ENST00000471472 736 ntBASIC4.84□□□□□ -1.63
USP11P51784 TRBVB-201ENST00000477100 408 ntBASIC4.84□□□□□ -1.63
USP11P51784 AP000926.1-201ENST00000479573 241 ntBASIC4.84□□□□□ -1.63
USP11P51784 AC105137.1-201ENST00000484355 562 ntBASIC4.84□□□□□ -1.63
USP11P51784 AC110792.1-201ENST00000491826 472 ntBASIC4.84□□□□□ -1.63
USP11P51784 RN7SKP122-201ENST00000515923 296 ntBASIC4.84□□□□□ -1.63
USP11P51784 RNA5SP519-201ENST00000516480 119 ntBASIC4.84□□□□□ -1.63
USP11P51784 SNORA40.15-201ENST00000516884 107 ntBASIC4.84□□□□□ -1.63
USP11P51784 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.84□□□□□ -1.63
USP11P51784 AC130289.1-201ENST00000577321 73 ntBASIC4.84□□□□□ -1.63
USP11P51784 IPO5P1-202ENST00000600039 287 ntBASIC4.84□□□□□ -1.63
USP11P51784 MIR6716-201ENST00000613413 80 ntBASIC4.84□□□□□ -1.63
USP11P51784 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.84□□□□□ -1.63
USP11P51784 AC130454.1-201ENST00000622948 401 ntBASIC4.84□□□□□ -1.63
USP11P51784 AC091903.1-201ENST00000624322 454 ntBASIC4.84□□□□□ -1.63
USP11P51784 MIR6830-201ENST00000636015 70 ntBASIC4.84□□□□□ -1.63
USP11P51784 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.84□□□□□ -1.64
USP11P51784 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
USP11P51784 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
USP11P51784 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
USP11P51784 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.84□□□□□ -1.64
USP11P51784 DDX10P1-201ENST00000448545 1933 ntBASIC4.84□□□□□ -1.64
USP11P51784 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.64
USP11P51784 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP11P51784 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.83□□□□□ -1.64
USP11P51784 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.83□□□□□ -1.64
USP11P51784 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP11P51784 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.83□□□□□ -1.64
USP11P51784 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP11P51784 AL590704.1-201ENST00000402856 794 ntBASIC4.83□□□□□ -1.64
USP11P51784 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.83□□□□□ -1.64
USP11P51784 SNORA11-201ENST00000408789 128 ntBASIC4.83□□□□□ -1.64
USP11P51784 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.83□□□□□ -1.64
USP11P51784 RNU2-33P-201ENST00000410344 192 ntBASIC4.83□□□□□ -1.64
USP11P51784 AP000275.1-201ENST00000411943 390 ntBASIC4.83□□□□□ -1.64
USP11P51784 AC008065.1-201ENST00000428525 348 ntBASIC4.83□□□□□ -1.64
USP11P51784 AC073063.1-201ENST00000434352 607 ntBASIC4.83□□□□□ -1.64
USP11P51784 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.83□□□□□ -1.64
USP11P51784 AC008264.1-201ENST00000447612 367 ntBASIC4.83□□□□□ -1.64
USP11P51784 RPS3AP46-201ENST00000448352 682 ntBASIC4.83□□□□□ -1.64
USP11P51784 NUTF2P3-201ENST00000448540 384 ntBASIC4.83□□□□□ -1.64
USP11P51784 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.83□□□□□ -1.64
USP11P51784 RPS26P28-201ENST00000470806 348 ntBASIC4.83□□□□□ -1.64
USP11P51784 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.83□□□□□ -1.64
USP11P51784 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.83□□□□□ -1.64
USP11P51784 AC109329.1-201ENST00000518744 317 ntBASIC4.83□□□□□ -1.64
USP11P51784 MTND6P33-201ENST00000571794 183 ntBASIC4.83□□□□□ -1.64
USP11P51784 MIR3939-201ENST00000582614 106 ntBASIC4.83□□□□□ -1.64
USP11P51784 VN1R91P-201ENST00000594377 169 ntBASIC4.83□□□□□ -1.64
USP11P51784 AC104763.2-201ENST00000604179 382 ntBASIC4.83□□□□□ -1.64
USP11P51784 AL034351.1-201ENST00000605288 668 ntBASIC4.83□□□□□ -1.64
USP11P51784 RNU6-85P-201ENST00000605989 107 ntBASIC4.83□□□□□ -1.64
USP11P51784 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.83□□□□□ -1.64
USP11P51784 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP11P51784 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.83□□□□□ -1.64
USP11P51784 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP11P51784 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP11P51784 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
USP11P51784 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
USP11P51784 SNORD27-201ENST00000363981 72 ntBASIC4.82□□□□□ -1.64
USP11P51784 U3.42-201ENST00000408746 214 ntBASIC4.82□□□□□ -1.64
USP11P51784 MTCO3P19-201ENST00000415864 321 ntBASIC4.82□□□□□ -1.64
USP11P51784 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.82□□□□□ -1.64
USP11P51784 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.82□□□□□ -1.64
USP11P51784 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.82□□□□□ -1.64
USP11P51784 RPL21P41-201ENST00000459863 264 ntBASIC4.82□□□□□ -1.64
USP11P51784 AC098869.1-201ENST00000481627 292 ntBASIC4.82□□□□□ -1.64
USP11P51784 RPL7P23-201ENST00000493874 747 ntBASIC4.82□□□□□ -1.64
USP11P51784 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP11P51784 AC099522.1-202ENST00000514718 367 ntBASIC4.82□□□□□ -1.64
USP11P51784 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.82□□□□□ -1.64
USP11P51784 Y_RNA.700-201ENST00000516806 100 ntBASIC4.82□□□□□ -1.64
USP11P51784 RNU6-352P-201ENST00000516908 107 ntBASIC4.82□□□□□ -1.64
USP11P51784 IGLV3-26-201ENST00000520756 302 ntBASIC4.82□□□□□ -1.64
USP11P51784 CYCSP29-201ENST00000533731 318 ntBASIC4.82□□□□□ -1.64
USP11P51784 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.82□□□□□ -1.64
USP11P51784 TVP23BP1-201ENST00000557500 617 ntBASIC4.82□□□□□ -1.64
USP11P51784 AC023575.1-201ENST00000580510 358 ntBASIC4.82□□□□□ -1.64
USP11P51784 MIR3910-1-201ENST00000580936 111 ntBASIC4.82□□□□□ -1.64
USP11P51784 AL590392.1-201ENST00000604960 446 ntBASIC4.82□□□□□ -1.64
USP11P51784 MIR1244-1-201ENST00000612829 85 ntBASIC4.82□□□□□ -1.64
USP11P51784 AP001282.2-201ENST00000616149 309 ntBASIC4.82□□□□□ -1.64
USP11P51784 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.82□□□□□ -1.64
USP11P51784 MIR8059-201ENST00000620427 81 ntBASIC4.82□□□□□ -1.64
USP11P51784 MIR1244-3-201ENST00000635744 85 ntBASIC4.82□□□□□ -1.64
USP11P51784 MIR1244-2-201ENST00000636449 85 ntBASIC4.82□□□□□ -1.64
USP11P51784 MIR1244-4-202ENST00000636813 85 ntBASIC4.82□□□□□ -1.64
USP11P51784 MIR6715B-201ENST00000637172 77 ntBASIC4.82□□□□□ -1.64
USP11P51784 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP11P51784 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms