Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNU6-741P-201ENST00000383889 107 ntBASIC3.25□□□□□ -1.89
CENPAP49450 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
CENPAP49450 MIR325-201ENST00000385260 98 ntBASIC3.25□□□□□ -1.89
CENPAP49450 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CENPAP49450 AL606923.1-201ENST00000406616 190 ntBASIC3.25□□□□□ -1.89
CENPAP49450 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.25□□□□□ -1.89
CENPAP49450 OR9R1P-201ENST00000412200 877 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AC080125.1-201ENST00000414888 684 ntBASIC3.25□□□□□ -1.89
CENPAP49450 OR6C66P-201ENST00000414917 930 ntBASIC3.25□□□□□ -1.89
CENPAP49450 MTND4LP11-201ENST00000422184 280 ntBASIC3.25□□□□□ -1.89
CENPAP49450 TMEM167AP1-201ENST00000423409 219 ntBASIC3.25□□□□□ -1.89
CENPAP49450 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.25□□□□□ -1.89
CENPAP49450 AL592045.1-201ENST00000429867 352 ntBASIC3.25□□□□□ -1.89
CENPAP49450 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
CENPAP49450 NDUFB4P6-201ENST00000436819 366 ntBASIC3.25□□□□□ -1.89
CENPAP49450 RPL39P36-201ENST00000490784 156 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AL160314.1-201ENST00000490836 438 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AC069439.1-201ENST00000494739 167 ntBASIC3.25□□□□□ -1.89
CENPAP49450 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.25□□□□□ -1.89
CENPAP49450 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.25□□□□□ -1.89
CENPAP49450 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.25□□□□□ -1.89
CENPAP49450 SCARNA14-201ENST00000516903 136 ntBASIC3.25□□□□□ -1.89
CENPAP49450 RNA5SP290-201ENST00000517133 127 ntBASIC3.25□□□□□ -1.89
CENPAP49450 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
CENPAP49450 CASP1P1-201ENST00000526345 212 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AP005435.4-201ENST00000529514 284 ntBASIC3.25□□□□□ -1.89
CENPAP49450 OR8R1P-201ENST00000543943 764 ntBASIC3.25□□□□□ -1.89
CENPAP49450 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
CENPAP49450 MIR3160-1-201ENST00000577972 85 ntBASIC3.25□□□□□ -1.89
CENPAP49450 MIR4506-201ENST00000584693 77 ntBASIC3.25□□□□□ -1.89
CENPAP49450 BNIP3P30-201ENST00000601184 574 ntBASIC3.25□□□□□ -1.89
CENPAP49450 BNIP3P9-201ENST00000603714 553 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AC098826.3-201ENST00000603823 466 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AC006077.1-201ENST00000604746 343 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AL020991.1-201ENST00000612314 373 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AP001486.3-201ENST00000615334 372 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AC010338.1-201ENST00000621823 717 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AP003355.3-201ENST00000623465 114 ntBASIC3.25□□□□□ -1.89
CENPAP49450 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.25□□□□□ -1.89
CENPAP49450 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.25□□□□□ -1.89
CENPAP49450 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CENPAP49450 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
CENPAP49450 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CENPAP49450 ASNSP3-201ENST00000451989 1306 ntBASIC3.24□□□□□ -1.89
CENPAP49450 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.24□□□□□ -1.89
CENPAP49450 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CENPAP49450 TPTE2P4-201ENST00000258589 1605 ntBASIC3.24□□□□□ -1.89
CENPAP49450 RNA5SP42-201ENST00000364278 115 ntBASIC3.24□□□□□ -1.89
CENPAP49450 Y_RNA.245-201ENST00000364493 95 ntBASIC3.24□□□□□ -1.89
CENPAP49450 RNU6-550P-201ENST00000391057 101 ntBASIC3.24□□□□□ -1.89
CENPAP49450 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CENPAP49450 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CENPAP49450 AL139039.1-201ENST00000401900 692 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AL139397.2-201ENST00000404529 772 ntBASIC3.24□□□□□ -1.89
CENPAP49450 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.24□□□□□ -1.89
CENPAP49450 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CENPAP49450 RN7SKP156-201ENST00000410308 342 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.24□□□□□ -1.89
CENPAP49450 SNRPEP10-201ENST00000420249 274 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AL158071.1-201ENST00000430315 461 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
CENPAP49450 WASF1P1-201ENST00000447560 1131 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.24□□□□□ -1.89
CENPAP49450 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.24□□□□□ -1.89
CENPAP49450 TRBV1-201ENST00000476502 284 ntBASIC3.24□□□□□ -1.89
CENPAP49450 EIF4EP3-201ENST00000498782 656 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CENPAP49450 AC117522.3-201ENST00000507974 584 ntBASIC3.24□□□□□ -1.89
CENPAP49450 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CENPAP49450 APOOP4-201ENST00000513530 597 ntBASIC3.24□□□□□ -1.89
CENPAP49450 RNU6-685P-201ENST00000517088 95 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.24□□□□□ -1.89
CENPAP49450 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.24□□□□□ -1.89
CENPAP49450 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.24□□□□□ -1.89
CENPAP49450 AL138889.2-201ENST00000603883 242 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AL161798.1-201ENST00000604630 131 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.24□□□□□ -1.89
CENPAP49450 AC068724.3-201ENST00000625906 87 ntBASIC3.24□□□□□ -1.89
CENPAP49450 RNA5SP196-201ENST00000625967 102 ntBASIC3.24□□□□□ -1.89
CENPAP49450 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.24□□□□□ -1.89
CENPAP49450 AL512643.1-201ENST00000635735 524 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC024614.3-201ENST00000637860 256 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AL354685.2-201ENST00000448218 1447 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC007785.2-201ENST00000598627 1916 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC103710.2-202ENST00000641454 2853 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
CENPAP49450 AC090740.1-201ENST00000623193 2262 ntBASIC3.23□□□□□ -1.89
CENPAP49450 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
CENPAP49450 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CENPAP49450 RNU6-451P-201ENST00000362921 107 ntBASIC3.23□□□□□ -1.89
CENPAP49450 RNU6-799P-201ENST00000363567 107 ntBASIC3.23□□□□□ -1.89
CENPAP49450 CD24P4-201ENST00000382840 243 ntBASIC3.23□□□□□ -1.89
CENPAP49450 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CENPAP49450 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.23□□□□□ -1.89
CENPAP49450 AL136116.1-201ENST00000403591 381 ntBASIC3.23□□□□□ -1.89
CENPAP49450 RNU2-33P-201ENST00000410344 192 ntBASIC3.23□□□□□ -1.89
CENPAP49450 RNU4-46P-201ENST00000410818 138 ntBASIC3.23□□□□□ -1.89
CENPAP49450 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms