Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 HMGB1P17-201ENST00000403495 628 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC023141.4-201ENST00000412031 328 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.68□□□□□ -2.14
GABRA4P48169 RPL23AP39-201ENST00000415533 405 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 AL139421.1-201ENST00000423010 169 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 PPP1R11P2-201ENST00000423543 382 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.68□□□□□ -2.14
GABRA4P48169 RPL21P134-201ENST00000453468 483 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 MTCO1P42-201ENST00000457379 726 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 AC107032.1-201ENST00000485945 480 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC020699.1-201ENST00000505161 445 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 RNU6-991P-201ENST00000516168 107 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 SCARNA15.2-201ENST00000516409 127 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 MIR892C-201ENST00000516410 77 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.68□□□□□ -2.14
GABRA4P48169 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
GABRA4P48169 AC092451.2-201ENST00000538746 658 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
GABRA4P48169 AC090615.1-201ENST00000577519 154 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC126365.2-201ENST00000580630 379 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC091834.1-201ENST00000614543 472 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AC023158.2-201ENST00000614876 543 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 MIR6130-201ENST00000619419 109 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 AL049641.1-201ENST00000441055 1948 ntBASIC1.68□□□□□ -2.14
GABRA4P48169 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.67□□□□□ -2.14
GABRA4P48169 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.67□□□□□ -2.14
GABRA4P48169 MTCO1P9-201ENST00000505577 1534 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 ADAM3A-203ENST00000461344 2157 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GABRA4P48169 snoZ40.1-201ENST00000364540 72 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GABRA4P48169 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
GABRA4P48169 Y_RNA.408-201ENST00000383987 102 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 RNU6-1083P-201ENST00000384022 107 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 RNA5SP213-201ENST00000391031 106 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GABRA4P48169 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC068533.2-201ENST00000411872 306 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 MTND4P3-201ENST00000417829 541 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 HMGB1P49-201ENST00000418882 569 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 MRPS36P1-201ENST00000421291 307 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 MTCO2P5-201ENST00000422621 426 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC018630.2-202ENST00000422992 927 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC093106.2-201ENST00000428212 385 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 HMGB1P9-201ENST00000429856 646 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AL645568.3-201ENST00000433683 316 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
GABRA4P48169 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.67□□□□□ -2.14
GABRA4P48169 AC114786.4-201ENST00000508771 728 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC114797.1-201ENST00000514003 728 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.67□□□□□ -2.14
GABRA4P48169 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
GABRA4P48169 AC124947.2-202ENST00000552735 133 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.67□□□□□ -2.14
GABRA4P48169 HMGN2P15-201ENST00000585707 270 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.67□□□□□ -2.14
GABRA4P48169 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.67□□□□□ -2.14
GABRA4P48169 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.67□□□□□ -2.14
GABRA4P48169 AC009237.15-201ENST00000610252 501 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC002550.2-201ENST00000621246 394 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.67□□□□□ -2.14
GABRA4P48169 AC126544.2-201ENST00000625174 749 ntBASIC1.67□□□□□ -2.14
GABRA4P48169 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.67□□□□□ -2.14
GABRA4P48169 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
GABRA4P48169 RNA5SP276-201ENST00000362580 94 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 Y_RNA.234-201ENST00000364409 97 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 RNU6-343P-201ENST00000364709 104 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 RNU6-1122P-201ENST00000384449 107 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 AC069282.1-201ENST00000411911 526 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 TPMTP2-201ENST00000414372 726 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.66□□□□□ -2.14
GABRA4P48169 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.66□□□□□ -2.14
GABRA4P48169 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.66□□□□□ -2.14
GABRA4P48169 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.66□□□□□ -2.14
GABRA4P48169 BMI1P1-201ENST00000445879 941 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 AL136380.1-201ENST00000447970 162 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 ATG12P2-201ENST00000456830 416 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.66□□□□□ -2.14
GABRA4P48169 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.66□□□□□ -2.14
GABRA4P48169 LARP1BP2-201ENST00000486594 519 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.66□□□□□ -2.14
GABRA4P48169 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.66□□□□□ -2.14
GABRA4P48169 RNU6-583P-201ENST00000516012 92 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 SNORA31.23-201ENST00000517219 133 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.66□□□□□ -2.14
GABRA4P48169 AP002748.2-201ENST00000528671 348 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 AL132857.1-201ENST00000555180 708 ntBASIC1.66□□□□□ -2.14
GABRA4P48169 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.66□□□□□ -2.14
GABRA4P48169 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.66□□□□□ -2.14
GABRA4P48169 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms