Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3□□□□□ -1.93
HNF4AP41235 AC018692.3-201ENST00000623929 123 ntBASIC3□□□□□ -1.93
HNF4AP41235 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3□□□□□ -1.93
HNF4AP41235 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3□□□□□ -1.93
HNF4AP41235 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3□□□□□ -1.93
HNF4AP41235 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HNF4AP41235 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
HNF4AP41235 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HNF4AP41235 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HNF4AP41235 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HNF4AP41235 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HNF4AP41235 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HNF4AP41235 AL353743.1-202ENST00000431724 1695 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 RNA5SP387-201ENST00000364226 106 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 Y_RNA.245-201ENST00000364493 95 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 SNORA68.1-201ENST00000364537 132 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 RN7SKP226-201ENST00000364912 300 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 SET-203ENST00000372688 801 ntTSL 2 BASIC2.99□□□□□ -1.93
HNF4AP41235 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HNF4AP41235 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HNF4AP41235 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 FCF1P10-201ENST00000407590 479 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 RNA5SP274-201ENST00000410484 108 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.99□□□□□ -1.93
HNF4AP41235 AL353777.1-201ENST00000425552 326 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.99□□□□□ -1.93
HNF4AP41235 AL513043.1-201ENST00000439124 535 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 RPS15AP7-201ENST00000439294 405 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.99□□□□□ -1.93
HNF4AP41235 RN7SL807P-201ENST00000470923 297 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC010631.1-201ENST00000474150 156 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.99□□□□□ -1.93
HNF4AP41235 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
HNF4AP41235 RNU6-430P-201ENST00000517078 107 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC027807.1-201ENST00000559921 996 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.99□□□□□ -1.93
HNF4AP41235 MIR3118-1-201ENST00000581787 76 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 OR1M4P-201ENST00000589199 287 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AL359999.1-201ENST00000604513 294 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 RNU6-87P-201ENST00000607561 108 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC109347.2-201ENST00000610220 349 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC099506.2-201ENST00000623074 221 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC110994.2-201ENST00000635481 492 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.99□□□□□ -1.93
HNF4AP41235 AC068137.3-201ENST00000639191 341 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC099654.12-201ENST00000639868 649 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 AC073869.6-201ENST00000640656 341 ntBASIC2.99□□□□□ -1.93
HNF4AP41235 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HNF4AP41235 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HNF4AP41235 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
HNF4AP41235 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HNF4AP41235 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HNF4AP41235 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HNF4AP41235 AL512633.1-201ENST00000399931 655 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AL513475.1-201ENST00000406602 315 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 C1DP2-201ENST00000418167 426 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 ISCA1P6-201ENST00000427740 390 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 C8orf59P1-201ENST00000429930 303 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 SNRPEP9-201ENST00000436794 238 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AC073614.1-201ENST00000438690 650 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 AC093899.1-201ENST00000457984 376 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 RPL37P6-201ENST00000460682 294 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 AC055855.1-201ENST00000489563 579 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AC105252.1-201ENST00000503089 286 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AF213884.2-201ENST00000510417 903 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.98□□□□□ -1.93
HNF4AP41235 AC100870.1-201ENST00000522035 505 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.98□□□□□ -1.93
HNF4AP41235 AC123904.3-201ENST00000547218 814 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.98□□□□□ -1.93
HNF4AP41235 AL359212.1-201ENST00000556608 614 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AP003465.2-201ENST00000602571 373 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 AC068790.3-201ENST00000602988 553 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 NRBF2P5-201ENST00000603087 788 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 SNHG22-203ENST00000617833 660 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HNF4AP41235 AC010149.2-201ENST00000637608 315 ntBASIC2.98□□□□□ -1.93
HNF4AP41235 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HNF4AP41235 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.98□□□□□ -1.93
HNF4AP41235 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HNF4AP41235 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 FARSBP1-201ENST00000435808 1778 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HNF4AP41235 GNG5P1-201ENST00000255500 204 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 OR5J1P-201ENST00000313544 939 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HNF4AP41235 Y_RNA.6-201ENST00000362350 114 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 RNU1-109P-201ENST00000383960 147 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 RNU5A-6P-201ENST00000384136 116 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms