Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SNCAP37840 RNU6-27P-201ENST00000516146 107 ntBASIC0.85□□□□□ -2.27
SNCAP37840 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.85□□□□□ -2.27
SNCAP37840 AP003497.1-201ENST00000528472 562 ntBASIC0.85□□□□□ -2.27
SNCAP37840 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.85□□□□□ -2.27
SNCAP37840 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SNCAP37840 MIR4422-201ENST00000581938 83 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC009977.1-201ENST00000586015 570 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.85□□□□□ -2.27
SNCAP37840 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.85□□□□□ -2.27
SNCAP37840 AC136601.2-201ENST00000604356 474 ntBASIC0.85□□□□□ -2.27
SNCAP37840 BNIP3P4-201ENST00000604946 565 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC006213.4-201ENST00000616184 634 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AL353997.5-201ENST00000618886 171 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC024595.1-201ENST00000623088 387 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AL109659.3-201ENST00000624985 950 ntBASIC0.85□□□□□ -2.27
SNCAP37840 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
SNCAP37840 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
SNCAP37840 AC010889.1-201ENST00000566193 2666 ntBASIC0.84□□□□□ -2.27
SNCAP37840 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SNCAP37840 MIR649-201ENST00000384843 97 ntBASIC0.84□□□□□ -2.27
SNCAP37840 HMGB1P17-201ENST00000403495 628 ntBASIC0.84□□□□□ -2.27
SNCAP37840 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 RPS6P15-201ENST00000431996 751 ntBASIC0.84□□□□□ -2.27
SNCAP37840 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.84□□□□□ -2.27
SNCAP37840 RPL23AP16-201ENST00000441715 421 ntBASIC0.84□□□□□ -2.27
SNCAP37840 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.84□□□□□ -2.27
SNCAP37840 HMGN2P18-201ENST00000450680 270 ntBASIC0.84□□□□□ -2.27
SNCAP37840 AP1S2P1-201ENST00000457344 379 ntBASIC0.84□□□□□ -2.27
SNCAP37840 AC114982.2-201ENST00000461396 358 ntBASIC0.84□□□□□ -2.27
SNCAP37840 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 RNA5SP112-201ENST00000515937 99 ntBASIC0.84□□□□□ -2.27
SNCAP37840 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.84□□□□□ -2.27
SNCAP37840 RPL21P5-201ENST00000554662 472 ntBASIC0.84□□□□□ -2.27
SNCAP37840 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.84□□□□□ -2.27
SNCAP37840 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 AL022067.1-201ENST00000602426 454 ntBASIC0.84□□□□□ -2.27
SNCAP37840 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.27
SNCAP37840 AC138473.1-201ENST00000605717 526 ntBASIC0.84□□□□□ -2.27
SNCAP37840 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.84□□□□□ -2.27
SNCAP37840 MFSD8-213ENST00000641134 1327 ntBASIC0.84□□□□□ -2.28
SNCAP37840 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.83□□□□□ -2.28
SNCAP37840 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
SNCAP37840 SNORA25.8-201ENST00000364831 128 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
SNCAP37840 SNORD51-201ENST00000384320 80 ntBASIC0.83□□□□□ -2.28
SNCAP37840 RNU1-78P-201ENST00000391248 165 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.83□□□□□ -2.28
SNCAP37840 AL354941.1-201ENST00000438600 464 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AL022238.1-201ENST00000442557 355 ntBASIC0.83□□□□□ -2.28
SNCAP37840 GDI2P2-201ENST00000445131 608 ntBASIC0.83□□□□□ -2.28
SNCAP37840 COX6CP18-201ENST00000448769 222 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AC015724.1-201ENST00000478577 156 ntBASIC0.83□□□□□ -2.28
SNCAP37840 OR8K4P-201ENST00000534608 872 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.83□□□□□ -2.28
SNCAP37840 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.83□□□□□ -2.28
SNCAP37840 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.83□□□□□ -2.28
SNCAP37840 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.83□□□□□ -2.28
SNCAP37840 MTCYBP22-201ENST00000603788 447 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AL161729.4-201ENST00000604650 476 ntBASIC0.83□□□□□ -2.28
SNCAP37840 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.83□□□□□ -2.28
SNCAP37840 Y_RNA.67-201ENST00000362870 100 ntBASIC0.82□□□□□ -2.28
SNCAP37840 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
SNCAP37840 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SNCAP37840 RNU6-921P-201ENST00000384361 107 ntBASIC0.82□□□□□ -2.28
SNCAP37840 SNORA17.3-201ENST00000391159 129 ntBASIC0.82□□□□□ -2.28
SNCAP37840 LINC01347-201ENST00000417964 355 ntBASIC0.82□□□□□ -2.28
SNCAP37840 SNRPEP10-201ENST00000420249 274 ntBASIC0.82□□□□□ -2.28
SNCAP37840 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.82□□□□□ -2.28
SNCAP37840 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.82□□□□□ -2.28
SNCAP37840 USP9YP35-201ENST00000435696 412 ntBASIC0.82□□□□□ -2.28
SNCAP37840 RPL26P6-201ENST00000440913 438 ntBASIC0.82□□□□□ -2.28
SNCAP37840 FDX1P2-201ENST00000450769 375 ntBASIC0.82□□□□□ -2.28
SNCAP37840 snoU13.23-201ENST00000458863 104 ntBASIC0.82□□□□□ -2.28
SNCAP37840 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
SNCAP37840 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.82□□□□□ -2.28
SNCAP37840 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.82□□□□□ -2.28
SNCAP37840 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.82□□□□□ -2.28
SNCAP37840 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
SNCAP37840 AC005668.1-201ENST00000571142 476 ntBASIC0.82□□□□□ -2.28
SNCAP37840 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.82□□□□□ -2.28
SNCAP37840 AP001542.2-201ENST00000593141 364 ntBASIC0.82□□□□□ -2.28
SNCAP37840 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.82□□□□□ -2.28
SNCAP37840 AC021851.1-201ENST00000608537 1082 ntBASIC0.82□□□□□ -2.28
SNCAP37840 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.82□□□□□ -2.28
SNCAP37840 AL356585.4-201ENST00000623078 1229 ntBASIC0.82□□□□□ -2.28
SNCAP37840 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SNCAP37840 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SNCAP37840 ZNF680P1-201ENST00000436625 1469 ntBASIC0.81□□□□□ -2.28
SNCAP37840 RNU6-486P-201ENST00000363116 107 ntBASIC0.81□□□□□ -2.28
SNCAP37840 SNORA70.7-201ENST00000384159 133 ntBASIC0.81□□□□□ -2.28
SNCAP37840 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SNCAP37840 SNORA11.2-201ENST00000408318 127 ntBASIC0.81□□□□□ -2.28
SNCAP37840 MIR1283-2-201ENST00000408621 87 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms