Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 Y_RNA.153-201ENST00000363615 91 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 SNORD113-7-201ENST00000363762 77 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 RNU6-379P-201ENST00000363813 104 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 RNA5SP167-201ENST00000365461 116 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 SNORD82-201ENST00000365530 70 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 RNU2-3P-201ENST00000410144 191 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 RNU2-36P-201ENST00000410361 191 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 OR2AS1P-201ENST00000427827 319 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC083863.1-201ENST00000438811 231 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 SUMO1P2-201ENST00000452524 304 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AP001992.1-205ENST00000462248 379 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AC021382.1-201ENST00000483523 359 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 RPS27P27-201ENST00000498779 255 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC100770.1-201ENST00000532310 322 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AP004242.1-201ENST00000533701 349 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.81□□□□□ -1.64
PDE6BP35913 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 MYL12BP1-201ENST00000569826 507 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AC010653.1-201ENST00000571108 881 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 AC023043.2-201ENST00000589678 1026 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.81□□□□□ -1.64
PDE6BP35913 AL365434.2-201ENST00000607979 234 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 AP001486.3-201ENST00000615334 372 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 HMGB1P24-202ENST00000615653 685 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.81□□□□□ -1.64
PDE6BP35913 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.81□□□□□ -1.64
PDE6BP35913 AL049641.1-201ENST00000441055 1948 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 AC008725.1-201ENST00000605123 2263 ntBASIC4.81□□□□□ -1.64
PDE6BP35913 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PDE6BP35913 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.81□□□□□ -1.64
PDE6BP35913 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDE6BP35913 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PDE6BP35913 AL049781.1-201ENST00000623195 3585 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 RNA5SP258-201ENST00000362750 119 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 Y_RNA.176-201ENST00000363815 109 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 RNA5SP51-201ENST00000364750 119 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.8□□□□□ -1.64
PDE6BP35913 SNORA3C-201ENST00000408792 125 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 RN7SKP177-201ENST00000410567 355 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.8□□□□□ -1.64
PDE6BP35913 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
PDE6BP35913 RPL21P93-201ENST00000480465 489 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
PDE6BP35913 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.8□□□□□ -1.64
PDE6BP35913 RNA5SP503-201ENST00000517047 117 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 HMGB1P41-201ENST00000520234 440 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 MTND4P7-201ENST00000523876 130 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PDE6BP35913 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.8□□□□□ -1.64
PDE6BP35913 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.8□□□□□ -1.64
PDE6BP35913 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.8□□□□□ -1.64
PDE6BP35913 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.8□□□□□ -1.64
PDE6BP35913 AL512605.2-201ENST00000592972 256 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.8□□□□□ -1.64
PDE6BP35913 AC025588.3-201ENST00000604182 274 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.8□□□□□ -1.64
PDE6BP35913 AL138713.1-201ENST00000624026 2130 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 AL669831.3-213ENST00000636676 183 ntBASIC4.8□□□□□ -1.64
PDE6BP35913 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDE6BP35913 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PDE6BP35913 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDE6BP35913 AL133383.2-201ENST00000622958 2336 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDE6BP35913 MIR448-201ENST00000362131 111 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 RNU6-97P-201ENST00000363387 104 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 Y_RNA.463-201ENST00000384271 102 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 RNY1P14-201ENST00000384426 108 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 Y_RNA.574-201ENST00000384766 95 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 MIR607-201ENST00000385241 96 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDE6BP35913 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.79□□□□□ -1.64
PDE6BP35913 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.79□□□□□ -1.64
PDE6BP35913 RAC1P6-201ENST00000423911 575 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 PSMA6P3-201ENST00000428242 164 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.79□□□□□ -1.64
PDE6BP35913 RPS3AP46-201ENST00000448352 682 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 SNRPFP3-201ENST00000457792 225 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 AC107222.1-201ENST00000510899 637 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 AC104136.1-201ENST00000512969 394 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 GMPSP1-201ENST00000514075 579 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 SNORA25.10-201ENST00000515926 124 ntBASIC4.79□□□□□ -1.64
PDE6BP35913 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms