Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 HMGB3P12-201ENST00000438745 556 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.82□□□□□ -1.96
CTNNA1P35221 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.82□□□□□ -1.96
CTNNA1P35221 AP001324.2-201ENST00000461163 319 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 HIGD1AP13-201ENST00000509878 289 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.82□□□□□ -1.96
CTNNA1P35221 SNORA3.4-201ENST00000515969 96 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 RNU6-581P-201ENST00000516214 105 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 RNU1-104P-201ENST00000517280 175 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC011979.2-201ENST00000527568 352 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.82□□□□□ -1.96
CTNNA1P35221 MIR5571-201ENST00000577998 113 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC234772.3-201ENST00000602277 528 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.82□□□□□ -1.96
CTNNA1P35221 RPL12P50-201ENST00000603116 116 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AL161756.2-201ENST00000604597 246 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC007938.3-201ENST00000604965 623 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC069294.1-201ENST00000608397 350 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 AC092192.1-201ENST00000633154 1018 ntBASIC2.82□□□□□ -1.96
CTNNA1P35221 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTNNA1P35221 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
CTNNA1P35221 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU6-486P-201ENST00000363116 107 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU1-140P-201ENST00000365040 165 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU5E-6P-201ENST00000365574 115 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU6-533P-201ENST00000384144 107 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU6-190P-201ENST00000384154 102 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 MIR301A-201ENST00000385261 86 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU6-920P-201ENST00000410926 92 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 OR51A5P-201ENST00000415429 942 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
CTNNA1P35221 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.81□□□□□ -1.96
CTNNA1P35221 AL109913.1-201ENST00000421173 514 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.81□□□□□ -1.96
CTNNA1P35221 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC093106.2-201ENST00000428212 385 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RPL30P4-201ENST00000429309 333 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.81□□□□□ -1.96
CTNNA1P35221 Z98742.2-201ENST00000431564 187 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC236972.1-201ENST00000433225 199 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.81□□□□□ -1.96
CTNNA1P35221 MTND1P12-201ENST00000455231 147 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.81□□□□□ -1.96
CTNNA1P35221 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CTNNA1P35221 LINC00888-204ENST00000487386 421 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.81□□□□□ -1.96
CTNNA1P35221 RNA5SP112-201ENST00000515937 99 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU2-10P-201ENST00000516375 211 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 RNU6-572P-201ENST00000516724 80 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC090136.1-201ENST00000520009 240 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.81□□□□□ -1.96
CTNNA1P35221 CYCSP39-201ENST00000565821 309 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC091489.2-201ENST00000566263 604 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 MIR3944-201ENST00000581277 108 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 MTCYBP22-201ENST00000603788 447 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC103710.2-201ENST00000609912 942 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AL392048.1-201ENST00000613946 534 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.81□□□□□ -1.96
CTNNA1P35221 AC091953.2-201ENST00000623979 160 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 CU459211.1-201ENST00000635667 749 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC093536.2-201ENST00000565257 1406 ntBASIC2.81□□□□□ -1.96
CTNNA1P35221 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.81□□□□□ -1.96
CTNNA1P35221 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTNNA1P35221 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTNNA1P35221 CDC27P3-201ENST00000635418 1910 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 RNU5F-6P-201ENST00000362979 116 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC007064.1-201ENST00000412238 351 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.8□□□□□ -1.96
CTNNA1P35221 HIGD1AP15-201ENST00000416198 280 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 MTND2P9-201ENST00000422293 931 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AL441985.1-201ENST00000457727 251 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC080013.2-201ENST00000460866 323 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC009902.1-201ENST00000519351 183 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 HMGB1P41-201ENST00000520234 440 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTNNA1P35221 MIR4325-201ENST00000583049 90 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 MIR4635-201ENST00000583759 79 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AC008751.2-201ENST00000597885 980 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC022893.3-201ENST00000607665 437 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.8□□□□□ -1.96
CTNNA1P35221 AL162274.2-201ENST00000614406 332 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC023510.2-201ENST00000622162 746 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC025048.6-202ENST00000627667 438 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 AC006927.3-201ENST00000638789 384 ntBASIC2.8□□□□□ -1.96
CTNNA1P35221 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.8□□□□□ -1.96
CTNNA1P35221 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTNNA1P35221 AL109809.4-201ENST00000603520 2185 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms