Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.2□□□□□ -1.9
ABCD3P28288 AP001893.2-201ENST00000526949 202 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.2□□□□□ -1.9
ABCD3P28288 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ABCD3P28288 MIR4703-201ENST00000577728 79 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 MIR6075-201ENST00000620782 95 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
ABCD3P28288 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCD3P28288 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ABCD3P28288 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
ABCD3P28288 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ABCD3P28288 SNORA71.3-201ENST00000362582 128 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 MIR23A-201ENST00000385245 73 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 SNORD17-201ENST00000390930 237 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 MTCO3P40-201ENST00000392516 676 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 UBE2V1P2-201ENST00000397758 440 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 RNU2-29P-201ENST00000410423 189 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 RPL7P46-201ENST00000425129 740 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ABCD3P28288 AL357552.1-201ENST00000445254 415 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.19□□□□□ -1.9
ABCD3P28288 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ABCD3P28288 AC027673.1-201ENST00000456245 405 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 RN7SL293P-201ENST00000481765 281 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 RPL21P13-201ENST00000488305 481 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AC025755.1-201ENST00000521306 278 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.19□□□□□ -1.9
ABCD3P28288 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 MIR4782-201ENST00000577987 79 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AC005498.1-201ENST00000592125 465 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AP001330.5-201ENST00000607176 411 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.19□□□□□ -1.9
ABCD3P28288 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AL359880.1-201ENST00000621879 266 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.19□□□□□ -1.9
ABCD3P28288 AC139792.3-201ENST00000623525 224 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ABCD3P28288 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.19□□□□□ -1.9
ABCD3P28288 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 U6.99-201ENST00000637524 83 ntBASIC3.19□□□□□ -1.9
ABCD3P28288 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ABCD3P28288 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.19□□□□□ -1.9
ABCD3P28288 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
ABCD3P28288 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ABCD3P28288 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
ABCD3P28288 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ABCD3P28288 AC004972.1-201ENST00000623934 2209 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ABCD3P28288 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ABCD3P28288 MIR412-201ENST00000362142 91 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCD3P28288 RNU6-550P-201ENST00000391057 101 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 SNORA40C-201ENST00000391285 128 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AL136116.1-201ENST00000403591 381 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 RN7SKP111-201ENST00000410349 271 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AL158071.1-201ENST00000430315 461 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCD3P28288 MYL8P-204ENST00000431574 518 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AL078601.1-201ENST00000444542 271 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCD3P28288 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCD3P28288 AL162395.1-201ENST00000457882 422 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 RPS27P26-201ENST00000494583 239 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 SNORA31.19-201ENST00000517079 126 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 MIR5692A1-201ENST00000580523 69 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.18□□□□□ -1.9
ABCD3P28288 AC013562.2-201ENST00000611632 603 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 AC084035.1-201ENST00000634543 607 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ABCD3P28288 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ABCD3P28288 AC032011.1-201ENST00000611703 1549 ntBASIC3.18□□□□□ -1.9
ABCD3P28288 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ABCD3P28288 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.18□□□□□ -1.9
ABCD3P28288 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ABCD3P28288 CKAP2P1-201ENST00000555477 2049 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ABCD3P28288 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ABCD3P28288 AL139276.1-201ENST00000311910 1001 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 RNA5SP50-201ENST00000363731 107 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms