Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VARSP26640 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
VARSP26640 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.25□□□□□ -1.57
VARSP26640 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARSP26640 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 FAM91A3P-201ENST00000456826 2544 ntBASIC5.24□□□□□ -1.57
VARSP26640 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VARSP26640 Y_RNA.23-201ENST00000362496 106 ntBASIC5.24□□□□□ -1.57
VARSP26640 Y_RNA.71-201ENST00000362892 104 ntBASIC5.24□□□□□ -1.57
VARSP26640 SNORD115-32-201ENST00000364079 82 ntBASIC5.24□□□□□ -1.57
VARSP26640 Y_RNA.218-201ENST00000364218 104 ntBASIC5.24□□□□□ -1.57
VARSP26640 Y_RNA.230-201ENST00000364348 109 ntBASIC5.24□□□□□ -1.57
VARSP26640 Y_RNA.238-201ENST00000364441 102 ntBASIC5.24□□□□□ -1.57
VARSP26640 Y_RNA.412-201ENST00000384001 104 ntBASIC5.24□□□□□ -1.57
VARSP26640 RNU6-541P-201ENST00000384709 110 ntBASIC5.24□□□□□ -1.57
VARSP26640 RPL37P18-201ENST00000411602 243 ntBASIC5.24□□□□□ -1.57
VARSP26640 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 AC096638.1-201ENST00000444678 216 ntBASIC5.24□□□□□ -1.57
VARSP26640 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 AC022795.1-201ENST00000473808 480 ntBASIC5.24□□□□□ -1.57
VARSP26640 AC098976.1-201ENST00000513014 541 ntBASIC5.24□□□□□ -1.57
VARSP26640 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
VARSP26640 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 AC021006.3-201ENST00000530771 192 ntBASIC5.24□□□□□ -1.57
VARSP26640 AC024940.3-201ENST00000538551 316 ntBASIC5.24□□□□□ -1.57
VARSP26640 MIR548X2-201ENST00000579776 100 ntBASIC5.24□□□□□ -1.57
VARSP26640 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.24□□□□□ -1.57
VARSP26640 AC011487.3-201ENST00000593607 453 ntBASIC5.24□□□□□ -1.57
VARSP26640 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 AL353748.2-201ENST00000622148 471 ntBASIC5.24□□□□□ -1.57
VARSP26640 snoU18.1-201ENST00000629629 71 ntBASIC5.24□□□□□ -1.57
VARSP26640 BMS1P21-201ENST00000634565 365 ntBASIC5.24□□□□□ -1.57
VARSP26640 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VARSP26640 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
VARSP26640 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VARSP26640 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 Z73965.1-201ENST00000623412 2297 ntBASIC5.23□□□□□ -1.57
VARSP26640 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 RNA5SP234-201ENST00000363916 119 ntBASIC5.23□□□□□ -1.57
VARSP26640 SNORA48.4-201ENST00000391089 134 ntBASIC5.23□□□□□ -1.57
VARSP26640 RAB9AP3-201ENST00000412737 573 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC091390.3-201ENST00000426478 338 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC007560.1-201ENST00000426912 237 ntBASIC5.23□□□□□ -1.57
VARSP26640 GSTM5P1-201ENST00000434751 660 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.23□□□□□ -1.57
VARSP26640 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.23□□□□□ -1.57
VARSP26640 RAB9AP1-201ENST00000449393 573 ntBASIC5.23□□□□□ -1.57
VARSP26640 FABP5P15-201ENST00000453566 214 ntBASIC5.23□□□□□ -1.57
VARSP26640 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VARSP26640 snoU109.2-201ENST00000459316 135 ntBASIC5.23□□□□□ -1.57
VARSP26640 RPS27AP9-201ENST00000477681 438 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC005840.1-201ENST00000498412 377 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC108043.1-201ENST00000512696 574 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC010265.1-201ENST00000513509 211 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.23□□□□□ -1.57
VARSP26640 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.23□□□□□ -1.57
VARSP26640 AP004607.2-201ENST00000533949 322 ntBASIC5.23□□□□□ -1.57
VARSP26640 NDUFB4P11-201ENST00000560510 395 ntBASIC5.23□□□□□ -1.57
VARSP26640 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.23□□□□□ -1.57
VARSP26640 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.23□□□□□ -1.57
VARSP26640 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.23□□□□□ -1.57
VARSP26640 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.23□□□□□ -1.57
VARSP26640 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 AL391516.1-201ENST00000554380 2449 ntBASIC5.23□□□□□ -1.57
VARSP26640 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
VARSP26640 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARSP26640 ZNF204P-201ENST00000416749 2397 ntBASIC5.22□□□□□ -1.57
VARSP26640 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VARSP26640 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARSP26640 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.22□□□□□ -1.57
VARSP26640 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARSP26640 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARSP26640 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARSP26640 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms