Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC068880.5-201ENST00000624331 290 ntBASIC2.97□□□□□ -1.93
CDH3P22223 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH3P22223 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH3P22223 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH3P22223 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CDH3P22223 AC000403.1-201ENST00000613696 3585 ntBASIC2.96□□□□□ -1.94
CDH3P22223 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 HSPE1P11-201ENST00000339579 310 ntBASIC2.96□□□□□ -1.94
CDH3P22223 MIR22-201ENST00000362190 85 ntBASIC2.96□□□□□ -1.94
CDH3P22223 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
CDH3P22223 Y_RNA.582-201ENST00000391023 95 ntBASIC2.96□□□□□ -1.94
CDH3P22223 NDUFB4P4-201ENST00000404822 243 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AL513331.1-201ENST00000411908 397 ntBASIC2.96□□□□□ -1.94
CDH3P22223 MTCO3P41-201ENST00000414801 328 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH3P22223 PIGFP2-201ENST00000421400 651 ntBASIC2.96□□□□□ -1.94
CDH3P22223 RPL35AP12-201ENST00000425362 338 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC093106.2-201ENST00000428212 385 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AL356867.1-201ENST00000429623 299 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH3P22223 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH3P22223 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH3P22223 NANOGNBP1-201ENST00000448444 480 ntBASIC2.96□□□□□ -1.94
CDH3P22223 GSTA11P-201ENST00000452866 669 ntBASIC2.96□□□□□ -1.94
CDH3P22223 MTCYBP1-201ENST00000454315 1119 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH3P22223 AC092798.1-201ENST00000458542 409 ntBASIC2.96□□□□□ -1.94
CDH3P22223 SNORD97-201ENST00000459187 142 ntBASIC2.96□□□□□ -1.94
CDH3P22223 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH3P22223 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH3P22223 AC082651.2-201ENST00000496833 166 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC138853.1-201ENST00000503549 823 ntBASIC2.96□□□□□ -1.94
CDH3P22223 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC091133.4-201ENST00000511142 308 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH3P22223 RNU2-10P-201ENST00000516375 211 ntBASIC2.96□□□□□ -1.94
CDH3P22223 SCARNA24.1-201ENST00000516465 137 ntBASIC2.96□□□□□ -1.94
CDH3P22223 RN7SKP258-201ENST00000517151 304 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC090572.1-201ENST00000519251 160 ntBASIC2.96□□□□□ -1.94
CDH3P22223 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH3P22223 AC087883.1-201ENST00000551882 391 ntBASIC2.96□□□□□ -1.94
CDH3P22223 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.96□□□□□ -1.94
CDH3P22223 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH3P22223 AL451007.1-201ENST00000595491 289 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC073648.5-201ENST00000603502 305 ntBASIC2.96□□□□□ -1.94
CDH3P22223 MIR98-201ENST00000606724 119 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AL161734.1-201ENST00000609720 557 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC135507.2-201ENST00000612443 309 ntBASIC2.96□□□□□ -1.94
CDH3P22223 ATP5A1P2-202ENST00000616464 443 ntBASIC2.96□□□□□ -1.94
CDH3P22223 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
CDH3P22223 AC136475.10-201ENST00000620253 385 ntBASIC2.96□□□□□ -1.94
CDH3P22223 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 AC026241.1-201ENST00000517873 2142 ntBASIC2.96□□□□□ -1.94
CDH3P22223 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH3P22223 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH3P22223 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH3P22223 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CDH3P22223 Y_RNA.22-201ENST00000362492 102 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RNU6-188P-201ENST00000364207 107 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RNU6-282P-201ENST00000365357 103 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RNU1-109P-201ENST00000383960 147 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RNU6-701P-201ENST00000384059 107 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RNU6-1197P-201ENST00000391183 107 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AL139397.2-201ENST00000404529 772 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RAC1P6-201ENST00000423911 575 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH3P22223 HMGB3P12-201ENST00000438745 556 ntBASIC2.95□□□□□ -1.94
CDH3P22223 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH3P22223 CBWD4P-201ENST00000445695 655 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH3P22223 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.95□□□□□ -1.94
CDH3P22223 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH3P22223 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.95□□□□□ -1.94
CDH3P22223 C1DP4-201ENST00000455429 424 ntBASIC2.95□□□□□ -1.94
CDH3P22223 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH3P22223 S100A11P2-201ENST00000467589 312 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC011825.1-201ENST00000484967 388 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC105252.1-201ENST00000503089 286 ntBASIC2.95□□□□□ -1.94
CDH3P22223 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH3P22223 RNU6-1092P-201ENST00000516955 87 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH3P22223 AP006587.4-201ENST00000526053 529 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AP003392.2-201ENST00000527269 208 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH3P22223 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH3P22223 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH3P22223 AL391840.1-201ENST00000571144 367 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH3P22223 MIR3609-201ENST00000582661 80 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH3P22223 AL136363.2-201ENST00000604173 851 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC007619.2-201ENST00000605743 379 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AP002360.4-201ENST00000606980 481 ntBASIC2.95□□□□□ -1.94
CDH3P22223 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH3P22223 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms