Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL607023.1-201ENST00000620045 248 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 CR381572.1-201ENST00000625098 102 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 OR4G11P-202ENST00000642116 1414 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL5A1P20908 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
COL5A1P20908 RNU6-374P-201ENST00000364146 108 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 RNU6-657P-201ENST00000383904 107 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 RNU6-444P-201ENST00000383988 108 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 RNU6-1293P-201ENST00000384077 107 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 RNA5SP492-201ENST00000411330 114 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC109780.2-201ENST00000413467 845 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.84□□□□□ -2.12
COL5A1P20908 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 HMGB1P31-201ENST00000437242 427 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 HMGN2P20-201ENST00000437531 273 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC092427.1-201ENST00000439177 601 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 MEMO1P3-201ENST00000459811 302 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 RPS29P11-201ENST00000496507 171 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 MTCYBP17-201ENST00000503579 789 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 MLLT10P2-201ENST00000506434 249 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 SNORA31.11-201ENST00000516528 139 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC060788.1-201ENST00000521318 469 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 HSPA8P13-201ENST00000523715 472 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 HSPE1P20-201ENST00000538133 289 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.84□□□□□ -2.12
COL5A1P20908 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC006362.1-201ENST00000567392 174 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 ROCK1P1-201ENST00000573767 549 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC011260.1-201ENST00000578420 472 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.84□□□□□ -2.12
COL5A1P20908 HULC.1-201ENST00000612720 240 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC010678.1-201ENST00000614118 713 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC008083.4-201ENST00000615076 444 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC027807.2-201ENST00000616099 408 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 RNU6-156P-201ENST00000621869 107 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AC098679.4-201ENST00000624241 654 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.84□□□□□ -2.12
COL5A1P20908 AC006927.3-201ENST00000638789 384 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 AL079343.1-201ENST00000572358 1771 ntBASIC1.84□□□□□ -2.12
COL5A1P20908 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
COL5A1P20908 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
COL5A1P20908 MTND4P4-201ENST00000439033 1366 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
COL5A1P20908 AC092104.1-201ENST00000497346 1441 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL5A1P20908 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL5A1P20908 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL5A1P20908 RNU6-115P-201ENST00000364310 107 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 SNORA26.8-201ENST00000391306 124 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AL021407.1-201ENST00000404531 386 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AL139098.1-201ENST00000407291 389 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 SSXP9-201ENST00000417503 292 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.83□□□□□ -2.12
COL5A1P20908 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.83□□□□□ -2.12
COL5A1P20908 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.83□□□□□ -2.12
COL5A1P20908 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.83□□□□□ -2.12
COL5A1P20908 RPL37P6-202ENST00000464216 403 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AC079804.2-201ENST00000490376 200 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 RNU6-488P-201ENST00000515918 99 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 RNA5SP82-201ENST00000516707 92 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.83□□□□□ -2.12
COL5A1P20908 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.83□□□□□ -2.12
COL5A1P20908 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.83□□□□□ -2.12
COL5A1P20908 MIR4637-201ENST00000582405 84 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.83□□□□□ -2.12
COL5A1P20908 BBIP1P1-201ENST00000602999 279 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AL451064.1-201ENST00000607718 471 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 AC092656.1-203ENST00000624134 423 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
COL5A1P20908 CKAP2P1-201ENST00000555477 2049 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL5A1P20908 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
COL5A1P20908 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL5A1P20908 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL5A1P20908 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 RNU6-931P-201ENST00000363850 107 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 RNU6-921P-201ENST00000384361 107 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 RPL23AP29-201ENST00000397284 453 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms