Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC012531.5-201ENST00000611375 151 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC091905.2-201ENST00000623143 306 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC3P19447 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC3P19447 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC3P19447 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 SNORD116-29-201ENST00000384516 83 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 RNU6-95P-201ENST00000384697 107 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 MIR34A-201ENST00000385130 110 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 RNU6-1106P-201ENST00000390845 107 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 MIR921-201ENST00000401133 56 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AL591034.1-201ENST00000407447 340 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 RNU6-293P-201ENST00000411259 106 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC3P19447 AC092047.1-201ENST00000424997 240 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 SKA2P1-201ENST00000425592 390 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 AC005534.2-201ENST00000431047 433 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC3P19447 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC3P19447 CEACAMP4-201ENST00000457676 421 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 RPS26P28-201ENST00000470806 348 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC011005.2-201ENST00000487324 359 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 RPL21P13-201ENST00000488305 481 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.93□□□□□ -1.62
ERCC3P19447 AC146944.2-203ENST00000502493 354 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC3P19447 AL592156.1-201ENST00000508758 304 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC139495.1-202ENST00000513164 354 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC023632.4-201ENST00000517783 191 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC3P19447 MIR4782-201ENST00000577987 79 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC3P19447 AC064836.2-201ENST00000609491 462 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC3P19447 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 MIR4727-201ENST00000622232 55 ntBASIC4.93□□□□□ -1.62
ERCC3P19447 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.93□□□□□ -1.62
ERCC3P19447 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ERCC3P19447 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ERCC3P19447 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC3P19447 AL133383.2-201ENST00000622958 2336 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
ERCC3P19447 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC3P19447 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC3P19447 CUL1P1-201ENST00000509510 2425 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 RHOT1P2-201ENST00000366423 333 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 RNU6-658P-201ENST00000384606 106 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 RN7SKP53-201ENST00000411337 315 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AL354751.2-201ENST00000415471 210 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AC245054.2-201ENST00000415639 319 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 UBE2V1P4-201ENST00000425374 344 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AL627311.1-201ENST00000431514 115 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC3P19447 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC3P19447 AL451050.1-201ENST00000450126 415 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AC092798.1-201ENST00000458542 409 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 snoU109.2-201ENST00000459316 135 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC3P19447 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC3P19447 AC093249.1-201ENST00000567049 203 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC3P19447 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC3P19447 AC123912.5-201ENST00000605470 343 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 MIR6875-201ENST00000617506 72 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC3P19447 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC3P19447 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC3P19447 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC3P19447 RLIMP1-201ENST00000339626 1680 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.92□□□□□ -1.62
ERCC3P19447 MAPK10-372ENST00000641954 3413 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ERCC3P19447 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC3P19447 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 MIR369-201ENST00000362155 70 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 SNORD14B-201ENST00000364533 90 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RNU6-384P-201ENST00000364900 104 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 SNORD6-201ENST00000365444 73 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RNU6-1329P-201ENST00000365664 107 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RNU6-43P-201ENST00000384302 107 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 Y_RNA.473-201ENST00000384333 102 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RPL21P65-201ENST00000406094 466 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 MIR1183-201ENST00000408856 89 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RN7SKP202-201ENST00000410439 330 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.91□□□□□ -1.62
ERCC3P19447 RPL23AP25-201ENST00000430973 463 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 MYL8P-204ENST00000431574 518 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC3P19447 AL118496.2-201ENST00000448300 230 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms