Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDGFRAP16234 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFRAP16234 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFRAP16234 AC092447.7-201ENST00000422212 1621 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 OR5J1P-201ENST00000313544 939 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 MIR26A1-201ENST00000362205 77 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 SNORD116-8-201ENST00000384365 95 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 SNORA26.8-201ENST00000391306 124 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 RNU6-193P-201ENST00000410977 107 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 NPM1P11-201ENST00000417106 855 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 SKA2P1-201ENST00000425592 390 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.91□□□□□ -1.94
PDGFRAP16234 RNU6-953P-201ENST00000459154 107 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 RPS29P20-201ENST00000489592 171 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC117522.3-201ENST00000507974 584 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 RPPH1-2P-201ENST00000516688 293 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.91□□□□□ -1.94
PDGFRAP16234 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.91□□□□□ -1.94
PDGFRAP16234 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.91□□□□□ -1.94
PDGFRAP16234 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.91□□□□□ -1.94
PDGFRAP16234 OSBPL9P5-201ENST00000542581 171 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.91□□□□□ -1.94
PDGFRAP16234 AC025281.1-201ENST00000567026 265 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 BNIP3P8-201ENST00000597863 560 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC174048.1-201ENST00000603389 144 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AL035413.2-201ENST00000604801 525 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AL451064.1-201ENST00000607718 471 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC005046.1-201ENST00000608515 625 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC091304.9-201ENST00000612091 226 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AL589994.2-201ENST00000621124 579 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AC097520.1-201ENST00000624435 385 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 AL603839.4-201ENST00000624658 1005 ntBASIC2.91□□□□□ -1.94
PDGFRAP16234 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PDGFRAP16234 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.9□□□□□ -1.95
PDGFRAP16234 CR848007.1-201ENST00000442354 1699 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFRAP16234 SNORA5B-201ENST00000363786 132 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 RNU4-91P-201ENST00000364778 135 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 RNU1-73P-201ENST00000383971 164 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 RPL23AP32-201ENST00000395315 459 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.9□□□□□ -1.95
PDGFRAP16234 RNU2-8P-201ENST00000410727 190 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.9□□□□□ -1.95
PDGFRAP16234 BPY2DP-201ENST00000422208 265 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 HMGB1P9-201ENST00000429856 646 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC087499.2-201ENST00000432861 149 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC105272.1-201ENST00000438604 198 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 MTND1P26-201ENST00000440488 538 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
PDGFRAP16234 MTND6P13-201ENST00000443510 523 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.9□□□□□ -1.95
PDGFRAP16234 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.9□□□□□ -1.95
PDGFRAP16234 MTND1P3-201ENST00000484956 952 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.9□□□□□ -1.95
PDGFRAP16234 RN7SKP132-201ENST00000516001 208 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 RNU7-51P-201ENST00000516560 62 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.9□□□□□ -1.95
PDGFRAP16234 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.9□□□□□ -1.95
PDGFRAP16234 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.9□□□□□ -1.95
PDGFRAP16234 GTF3AP2-201ENST00000557014 266 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC138761.3-201ENST00000579993 334 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.9□□□□□ -1.95
PDGFRAP16234 AC008088.1-201ENST00000580993 280 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.9□□□□□ -1.95
PDGFRAP16234 AC005498.1-201ENST00000592125 465 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AL161734.1-201ENST00000609720 557 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.9□□□□□ -1.95
PDGFRAP16234 UCA1.1-201ENST00000620952 75 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 SCARNA15.3-201ENST00000626315 122 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 SCARNA4.1-201ENST00000628597 123 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.9□□□□□ -1.95
PDGFRAP16234 MTND5P42-201ENST00000637720 498 ntBASIC2.9□□□□□ -1.95
PDGFRAP16234 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFRAP16234 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFRAP16234 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFRAP16234 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFRAP16234 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.89□□□□□ -1.95
PDGFRAP16234 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.89□□□□□ -1.95
PDGFRAP16234 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.89□□□□□ -1.95
PDGFRAP16234 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDGFRAP16234 RNU5E-1-201ENST00000362477 120 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 SNORD56.2-201ENST00000363242 71 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AL356057.2-201ENST00000403318 432 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC023141.4-201ENST00000412031 328 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 RPS12P24-201ENST00000412619 387 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 RPL26P27-201ENST00000414397 437 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AL358075.3-201ENST00000426289 226 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.89□□□□□ -1.95
PDGFRAP16234 RPL36AP53-201ENST00000432891 316 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms