Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-985P-201ENST00000410182 104 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 NDUFB4P7-201ENST00000423198 363 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 USMG5P1-201ENST00000425964 177 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 DNAJC19P7-201ENST00000428811 344 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 AL592045.1-201ENST00000429867 352 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.16□□□□□ -1.74
COL6A2P12110 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.16□□□□□ -1.74
COL6A2P12110 RPS20P22-201ENST00000473700 357 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 RPS29P19-201ENST00000479709 171 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.16□□□□□ -1.74
COL6A2P12110 AL049874.1-201ENST00000489560 388 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 HMGB1P30-201ENST00000492455 606 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
COL6A2P12110 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.16□□□□□ -1.74
COL6A2P12110 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.16□□□□□ -1.74
COL6A2P12110 SNORA25.10-201ENST00000515926 124 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.16□□□□□ -1.74
COL6A2P12110 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.16□□□□□ -1.74
COL6A2P12110 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.16□□□□□ -1.74
COL6A2P12110 MED28P6-201ENST00000558776 231 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 AC002545.1-201ENST00000592511 181 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 AL161798.1-201ENST00000604630 131 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.16□□□□□ -1.74
COL6A2P12110 FAM27D1-201ENST00000612308 341 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 AL355810.1-201ENST00000614629 552 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 MTND4P1-201ENST00000457501 1466 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 HSPA8P1-201ENST00000425843 1833 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 USP8P1-201ENST00000494673 3183 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL6A2P12110 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL6A2P12110 OR4G2P-202ENST00000641004 1759 ntBASIC4.15□□□□□ -1.74
COL6A2P12110 AC116096.1-201ENST00000566804 2314 ntBASIC4.15□□□□□ -1.74
COL6A2P12110 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
COL6A2P12110 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.15□□□□□ -1.75
COL6A2P12110 MIR129-1-201ENST00000384972 72 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL6A2P12110 MRPL42P3-201ENST00000401492 326 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.15□□□□□ -1.75
COL6A2P12110 USP9YP30-201ENST00000430729 455 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.15□□□□□ -1.75
COL6A2P12110 RPL23AP52-201ENST00000439311 478 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.15□□□□□ -1.75
COL6A2P12110 PHBP16-201ENST00000446318 950 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 TPT1P12-201ENST00000448968 492 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 RN7SL98P-201ENST00000462271 300 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 AC022493.1-201ENST00000492984 337 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 RN7SL810P-201ENST00000493031 276 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.15□□□□□ -1.75
COL6A2P12110 AL359273.1-201ENST00000510918 627 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.15□□□□□ -1.75
COL6A2P12110 IGKV2-38-201ENST00000517443 247 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.15□□□□□ -1.75
COL6A2P12110 ATP5F1P5-201ENST00000526403 760 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 MIR4680-201ENST00000580906 66 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 AC005899.2-201ENST00000584353 90 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 AC234771.5-201ENST00000600161 514 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 RNU6-85P-201ENST00000605989 107 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 7SK.10-201ENST00000621414 298 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 MIR7641-1-201ENST00000627518 61 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 AL512643.1-201ENST00000635735 524 ntBASIC4.15□□□□□ -1.75
COL6A2P12110 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
COL6A2P12110 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.15□□□□□ -1.75
COL6A2P12110 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL6A2P12110 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
COL6A2P12110 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL6A2P12110 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL6A2P12110 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL6A2P12110 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL6A2P12110 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL6A2P12110 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.14□□□□□ -1.75
COL6A2P12110 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL6A2P12110 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 RNU6-512P-201ENST00000364438 103 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 RNU6-395P-201ENST00000365662 106 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AL356057.3-201ENST00000402607 340 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 RNU4-6P-201ENST00000410804 122 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 Z85995.1-201ENST00000415547 335 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 TOMM22P1-201ENST00000418578 312 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.14□□□□□ -1.75
COL6A2P12110 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AC091390.3-201ENST00000426478 338 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 HMGB1P9-201ENST00000429856 646 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.14□□□□□ -1.75
COL6A2P12110 SNRPEP4-201ENST00000435815 279 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 HMGN2P21-201ENST00000447764 270 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.14□□□□□ -1.75
COL6A2P12110 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.14□□□□□ -1.75
COL6A2P12110 AC023141.12-201ENST00000512399 199 ntBASIC4.14□□□□□ -1.75
COL6A2P12110 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.14□□□□□ -1.75
COL6A2P12110 RNU6-307P-201ENST00000516743 106 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms