Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TTC39CP1-201ENST00000512513 755 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 RNU4-49P-201ENST00000516080 140 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AC126177.3-201ENST00000551839 688 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 MIR4703-201ENST00000577728 79 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AC024619.4-201ENST00000580924 316 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AC012443.1-201ENST00000605605 231 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 uc_338.5-201ENST00000611839 155 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 U6.114-201ENST00000636407 96 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNRPA1P09661 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.15□□□□□ -1.75
SNRPA1P09661 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNRPA1P09661 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.15□□□□□ -1.75
SNRPA1P09661 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SNRPA1P09661 AC058791.1-201ENST00000608412 3198 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.14□□□□□ -1.75
SNRPA1P09661 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNRPA1P09661 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNRPA1P09661 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
SNRPA1P09661 Y_RNA.184-201ENST00000363884 108 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 RNU6-38P-201ENST00000384085 107 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 SNORA7.4-201ENST00000384249 137 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 SNORA24.1-201ENST00000384401 135 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 RNU6-510P-201ENST00000391239 108 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 FAT1P1-201ENST00000406588 507 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 RNU4-65P-201ENST00000410473 140 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 RNU6-712P-201ENST00000410558 100 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 SSXP9-201ENST00000417503 292 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 BEND7P1-201ENST00000422058 457 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 RPL23AP69-201ENST00000431134 458 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.14□□□□□ -1.75
SNRPA1P09661 AC007677.1-201ENST00000445757 515 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.14□□□□□ -1.75
SNRPA1P09661 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.14□□□□□ -1.75
SNRPA1P09661 RNU6-333P-201ENST00000459117 107 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 snoU13.3-201ENST00000459441 104 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC007547.1-201ENST00000462177 490 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AL049873.1-201ENST00000480540 376 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.14□□□□□ -1.75
SNRPA1P09661 AC026801.2-201ENST00000515352 425 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 Y_RNA.701-201ENST00000516812 110 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 RNU6-1092P-201ENST00000516955 87 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC103783.1-201ENST00000520506 373 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC090281.1-201ENST00000523019 276 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.14□□□□□ -1.75
SNRPA1P09661 AC005668.1-201ENST00000571142 476 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AL355375.2-201ENST00000574825 175 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 MIR4742-201ENST00000581069 85 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC021646.1-201ENST00000605469 484 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.14□□□□□ -1.75
SNRPA1P09661 AC011155.2-201ENST00000623202 216 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 AC025034.2-201ENST00000623264 286 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.14□□□□□ -1.75
SNRPA1P09661 MIR1302-1-201ENST00000637932 143 ntBASIC4.14□□□□□ -1.75
SNRPA1P09661 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNRPA1P09661 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNRPA1P09661 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNRPA1P09661 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.13□□□□□ -1.75
SNRPA1P09661 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNRPA1P09661 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.13□□□□□ -1.75
SNRPA1P09661 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNRPA1P09661 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNRPA1P09661 AL139276.1-201ENST00000311910 1001 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNRPA1P09661 AL356057.2-201ENST00000403318 432 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RNU4-26P-201ENST00000410270 107 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RNU2-29P-201ENST00000410423 189 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 MTND3P8-201ENST00000412909 339 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL137014.1-201ENST00000420490 1226 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.13□□□□□ -1.75
SNRPA1P09661 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL118496.2-201ENST00000448300 230 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL162389.1-201ENST00000449233 177 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.13□□□□□ -1.75
SNRPA1P09661 SNORD97-201ENST00000459187 142 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AC008481.1-201ENST00000463278 396 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RPL7P47-201ENST00000497299 556 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 HMGN1P13-201ENST00000505795 138 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RNU6-1095P-201ENST00000516148 108 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 Y_RNA.665-201ENST00000516177 98 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RNU1-103P-201ENST00000516502 125 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RNU6-1038P-201ENST00000516516 104 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 RPL7P20-201ENST00000520308 745 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.13□□□□□ -1.75
SNRPA1P09661 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.13□□□□□ -1.75
SNRPA1P09661 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.13□□□□□ -1.75
SNRPA1P09661 AP004242.1-201ENST00000533701 349 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.13□□□□□ -1.75
SNRPA1P09661 AL121603.1-201ENST00000553815 142 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.13□□□□□ -1.75
SNRPA1P09661 PSMA3P-201ENST00000555485 635 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.13□□□□□ -1.75
SNRPA1P09661 MIR5583-1-201ENST00000580941 59 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms