Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RPL30P2-201ENST00000414021 291 ntBASIC3.75□□□□□ -1.81
RHOP08100 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.75□□□□□ -1.81
RHOP08100 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.75□□□□□ -1.81
RHOP08100 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.75□□□□□ -1.81
RHOP08100 AC024082.2-201ENST00000434771 238 ntBASIC3.75□□□□□ -1.81
RHOP08100 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RHOP08100 CYCSP32-201ENST00000440548 321 ntBASIC3.75□□□□□ -1.81
RHOP08100 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.75□□□□□ -1.81
RHOP08100 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
RHOP08100 AC020550.1-201ENST00000447385 163 ntBASIC3.75□□□□□ -1.81
RHOP08100 Y_RNA.632-201ENST00000459189 102 ntBASIC3.75□□□□□ -1.81
RHOP08100 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RHOP08100 RPS26P15-201ENST00000488067 348 ntBASIC3.75□□□□□ -1.81
RHOP08100 TRBVA-201ENST00000498804 316 ntBASIC3.75□□□□□ -1.81
RHOP08100 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.75□□□□□ -1.81
RHOP08100 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.75□□□□□ -1.81
RHOP08100 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.75□□□□□ -1.81
RHOP08100 RNA5SP309-201ENST00000516670 106 ntBASIC3.75□□□□□ -1.81
RHOP08100 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.75□□□□□ -1.81
RHOP08100 AP006587.4-201ENST00000526053 529 ntBASIC3.75□□□□□ -1.81
RHOP08100 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.75□□□□□ -1.81
RHOP08100 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.75□□□□□ -1.81
RHOP08100 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.75□□□□□ -1.81
RHOP08100 AL365204.3-201ENST00000612448 685 ntBASIC3.75□□□□□ -1.81
RHOP08100 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.75□□□□□ -1.81
RHOP08100 AC103858.2-201ENST00000621471 543 ntBASIC3.75□□□□□ -1.81
RHOP08100 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.75□□□□□ -1.81
RHOP08100 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RHOP08100 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RHOP08100 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RHOP08100 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 Y_RNA.315-201ENST00000365117 102 ntBASIC3.74□□□□□ -1.81
RHOP08100 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 Y_RNA.419-201ENST00000384041 102 ntBASIC3.74□□□□□ -1.81
RHOP08100 RNU6-1127P-201ENST00000384580 107 ntBASIC3.74□□□□□ -1.81
RHOP08100 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 RNA5SP120-201ENST00000410900 112 ntBASIC3.74□□□□□ -1.81
RHOP08100 Z92545.1-201ENST00000411782 234 ntBASIC3.74□□□□□ -1.81
RHOP08100 POLHP1-201ENST00000411806 470 ntBASIC3.74□□□□□ -1.81
RHOP08100 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC236972.2-201ENST00000434979 310 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.74□□□□□ -1.81
RHOP08100 SNORD19B-201ENST00000459623 84 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC004801.2-202ENST00000463559 283 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC083904.1-201ENST00000487828 231 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.74□□□□□ -1.81
RHOP08100 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.74□□□□□ -1.81
RHOP08100 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.74□□□□□ -1.81
RHOP08100 RNU6-1038P-201ENST00000516516 104 ntBASIC3.74□□□□□ -1.81
RHOP08100 SNORA31.22-201ENST00000517204 135 ntBASIC3.74□□□□□ -1.81
RHOP08100 RN7SKP57-201ENST00000517248 293 ntBASIC3.74□□□□□ -1.81
RHOP08100 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 AP000889.2-201ENST00000532684 490 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.74□□□□□ -1.81
RHOP08100 OR4H12P-201ENST00000556269 907 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC012182.1-201ENST00000570133 895 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC022432.1-201ENST00000595739 310 ntBASIC3.74□□□□□ -1.81
RHOP08100 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.74□□□□□ -1.81
RHOP08100 AC103705.1-201ENST00000619013 241 ntBASIC3.74□□□□□ -1.81
RHOP08100 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
RHOP08100 AC018555.1-201ENST00000567548 1980 ntBASIC3.74□□□□□ -1.81
RHOP08100 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHOP08100 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RHOP08100 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHOP08100 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHOP08100 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.73□□□□□ -1.81
RHOP08100 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHOP08100 SNORD113-7-201ENST00000363762 77 ntBASIC3.73□□□□□ -1.81
RHOP08100 Y_RNA.212-201ENST00000364177 102 ntBASIC3.73□□□□□ -1.81
RHOP08100 Y_RNA.339-201ENST00000365325 102 ntBASIC3.73□□□□□ -1.81
RHOP08100 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.73□□□□□ -1.81
RHOP08100 RNU6-701P-201ENST00000384059 107 ntBASIC3.73□□□□□ -1.81
RHOP08100 RNU6-76P-201ENST00000384060 104 ntBASIC3.73□□□□□ -1.81
RHOP08100 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.73□□□□□ -1.81
RHOP08100 RNA5SP306-201ENST00000411087 107 ntBASIC3.73□□□□□ -1.81
RHOP08100 RPL7P10-201ENST00000417407 739 ntBASIC3.73□□□□□ -1.81
RHOP08100 AC005326.1-201ENST00000429197 123 ntBASIC3.73□□□□□ -1.81
RHOP08100 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.73□□□□□ -1.81
RHOP08100 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.73□□□□□ -1.81
RHOP08100 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.73□□□□□ -1.81
RHOP08100 AC005019.1-201ENST00000436455 431 ntBASIC3.73□□□□□ -1.81
RHOP08100 NDUFA5P4-201ENST00000436704 385 ntBASIC3.73□□□□□ -1.81
RHOP08100 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.73□□□□□ -1.81
RHOP08100 RPS15AP27-201ENST00000449183 343 ntBASIC3.73□□□□□ -1.81
RHOP08100 RN7SL807P-201ENST00000470923 297 ntBASIC3.73□□□□□ -1.81
RHOP08100 RPL31P13-201ENST00000484151 370 ntBASIC3.73□□□□□ -1.81
RHOP08100 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.73□□□□□ -1.81
RHOP08100 RBBP4P6-201ENST00000508098 202 ntBASIC3.73□□□□□ -1.81
RHOP08100 SNORA31.3-201ENST00000516029 96 ntBASIC3.73□□□□□ -1.81
RHOP08100 RNU2-27P-201ENST00000516185 142 ntBASIC3.73□□□□□ -1.81
RHOP08100 RN7SKP258-201ENST00000517151 304 ntBASIC3.73□□□□□ -1.81
RHOP08100 SNORA25.17-201ENST00000517184 124 ntBASIC3.73□□□□□ -1.81
RHOP08100 AC090136.1-201ENST00000520009 240 ntBASIC3.73□□□□□ -1.81
RHOP08100 AL121603.1-201ENST00000553815 142 ntBASIC3.73□□□□□ -1.81
RHOP08100 POLR3GP2-201ENST00000588366 668 ntBASIC3.73□□□□□ -1.81
RHOP08100 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
RHOP08100 AC103710.3-201ENST00000608157 948 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms