Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL008629.1-201ENST00000438615 184 ntBASIC2.34□□□□□ -2.03
RETP07949 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.34□□□□□ -2.03
RETP07949 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 AL139824.2-201ENST00000458731 1095 ntBASIC2.34□□□□□ -2.03
RETP07949 RPS27P26-201ENST00000494583 239 ntBASIC2.34□□□□□ -2.03
RETP07949 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RETP07949 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 AC108729.3-201ENST00000513484 108 ntBASIC2.34□□□□□ -2.03
RETP07949 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.34□□□□□ -2.03
RETP07949 RNU6-1256P-201ENST00000516539 103 ntBASIC2.34□□□□□ -2.03
RETP07949 AP003467.2-201ENST00000520175 319 ntBASIC2.34□□□□□ -2.03
RETP07949 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
RETP07949 AC087241.2-201ENST00000535801 324 ntBASIC2.34□□□□□ -2.03
RETP07949 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.34□□□□□ -2.03
RETP07949 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 AP001004.1-201ENST00000582468 324 ntBASIC2.34□□□□□ -2.03
RETP07949 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 AL596327.1-201ENST00000603629 213 ntBASIC2.34□□□□□ -2.03
RETP07949 Z99289.3-201ENST00000605586 594 ntBASIC2.34□□□□□ -2.03
RETP07949 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.34□□□□□ -2.03
RETP07949 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.34□□□□□ -2.03
RETP07949 AL357080.1-201ENST00000617394 239 ntBASIC2.34□□□□□ -2.03
RETP07949 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.34□□□□□ -2.03
RETP07949 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
RETP07949 AL137003.2-201ENST00000606924 2538 ntBASIC2.33□□□□□ -2.04
RETP07949 TPTE2P4-201ENST00000258589 1605 ntBASIC2.33□□□□□ -2.04
RETP07949 RNU6-198P-201ENST00000384258 104 ntBASIC2.33□□□□□ -2.04
RETP07949 SNORA41-201ENST00000384675 132 ntBASIC2.33□□□□□ -2.04
RETP07949 MIR514A1-201ENST00000385133 98 ntBASIC2.33□□□□□ -2.04
RETP07949 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.33□□□□□ -2.04
RETP07949 AL356421.1-201ENST00000403255 413 ntBASIC2.33□□□□□ -2.04
RETP07949 GSTA9P-201ENST00000406231 611 ntBASIC2.33□□□□□ -2.04
RETP07949 AL513475.1-201ENST00000406602 315 ntBASIC2.33□□□□□ -2.04
RETP07949 MIR1290-201ENST00000408735 78 ntBASIC2.33□□□□□ -2.04
RETP07949 RN7SKP140-201ENST00000411196 284 ntBASIC2.33□□□□□ -2.04
RETP07949 PIGPP2-201ENST00000411569 458 ntBASIC2.33□□□□□ -2.04
RETP07949 AC005005.2-201ENST00000420779 380 ntBASIC2.33□□□□□ -2.04
RETP07949 Z98742.2-201ENST00000431564 187 ntBASIC2.33□□□□□ -2.04
RETP07949 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.33□□□□□ -2.04
RETP07949 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.33□□□□□ -2.04
RETP07949 ARPC3P1-201ENST00000437218 533 ntBASIC2.33□□□□□ -2.04
RETP07949 AL354941.1-201ENST00000438600 464 ntBASIC2.33□□□□□ -2.04
RETP07949 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.33□□□□□ -2.04
RETP07949 DDX3P2-201ENST00000446138 111 ntBASIC2.33□□□□□ -2.04
RETP07949 RPL23AP35-201ENST00000451906 501 ntBASIC2.33□□□□□ -2.04
RETP07949 MTND2P24-201ENST00000453434 806 ntBASIC2.33□□□□□ -2.04
RETP07949 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.33□□□□□ -2.04
RETP07949 RNU7-26P-201ENST00000458980 63 ntBASIC2.33□□□□□ -2.04
RETP07949 AC004263.1-201ENST00000479327 332 ntBASIC2.33□□□□□ -2.04
RETP07949 LARP1BP2-201ENST00000486594 519 ntBASIC2.33□□□□□ -2.04
RETP07949 AC098862.1-201ENST00000504991 413 ntBASIC2.33□□□□□ -2.04
RETP07949 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.33□□□□□ -2.04
RETP07949 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.33□□□□□ -2.04
RETP07949 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
RETP07949 RNU6-1053P-201ENST00000515930 101 ntBASIC2.33□□□□□ -2.04
RETP07949 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.33□□□□□ -2.04
RETP07949 AP003497.1-201ENST00000528472 562 ntBASIC2.33□□□□□ -2.04
RETP07949 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.33□□□□□ -2.04
RETP07949 HMGB1P14-201ENST00000557424 591 ntBASIC2.33□□□□□ -2.04
RETP07949 RPS3AP23-202ENST00000574601 686 ntBASIC2.33□□□□□ -2.04
RETP07949 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.33□□□□□ -2.04
RETP07949 MIR4999-201ENST00000585029 91 ntBASIC2.33□□□□□ -2.04
RETP07949 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.33□□□□□ -2.04
RETP07949 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.33□□□□□ -2.04
RETP07949 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RETP07949 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.33□□□□□ -2.04
RETP07949 MIR6130-201ENST00000619419 109 ntBASIC2.33□□□□□ -2.04
RETP07949 AC017037.3-201ENST00000625016 472 ntBASIC2.33□□□□□ -2.04
RETP07949 AC103706.2-201ENST00000638080 240 ntBASIC2.33□□□□□ -2.04
RETP07949 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RETP07949 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RETP07949 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RETP07949 CR848007.1-201ENST00000442354 1699 ntBASIC2.32□□□□□ -2.04
RETP07949 RNU6-1078P-201ENST00000364522 103 ntBASIC2.32□□□□□ -2.04
RETP07949 RNU6-744P-201ENST00000365557 107 ntBASIC2.32□□□□□ -2.04
RETP07949 RNU6-1316P-201ENST00000384242 108 ntBASIC2.32□□□□□ -2.04
RETP07949 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RETP07949 SNORA26.9-201ENST00000391322 122 ntBASIC2.32□□□□□ -2.04
RETP07949 MIR1287-201ENST00000408492 90 ntBASIC2.32□□□□□ -2.04
RETP07949 U3.37-201ENST00000408528 213 ntBASIC2.32□□□□□ -2.04
RETP07949 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.32□□□□□ -2.04
RETP07949 AL365496.1-201ENST00000426885 215 ntBASIC2.32□□□□□ -2.04
RETP07949 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
RETP07949 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 SNRPEP7-201ENST00000438350 220 ntBASIC2.32□□□□□ -2.04
RETP07949 AC009237.8-201ENST00000445492 379 ntBASIC2.32□□□□□ -2.04
RETP07949 SNORD121B-201ENST00000458838 81 ntBASIC2.32□□□□□ -2.04
RETP07949 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.32□□□□□ -2.04
RETP07949 AC090096.1-201ENST00000489168 390 ntBASIC2.32□□□□□ -2.04
RETP07949 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms