Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MTCO2P21-201ENST00000419780 677 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AC104651.1-201ENST00000427559 735 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN9O95484 CR769776.1-201ENST00000441254 787 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 RPL7P36-201ENST00000444633 681 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN9O95484 AL121769.1-201ENST00000469473 401 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 NDUFB4P2-201ENST00000509515 391 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 BTF3P12-201ENST00000519620 469 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN9O95484 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.29□□□□□ -2.04
CLDN9O95484 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN9O95484 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN9O95484 AL589743.7-201ENST00000612637 233 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AL607023.1-201ENST00000620045 248 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AC079416.3-201ENST00000624479 549 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AC091965.5-201ENST00000624785 342 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN9O95484 AL137003.2-201ENST00000606924 2538 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 ADAM3A-203ENST00000461344 2157 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN9O95484 ZNF876P-202ENST00000398732 1485 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 AL021407.1-201ENST00000404531 386 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 NDUFS5P1-201ENST00000405668 289 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 SSR1P2-201ENST00000415208 787 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN9O95484 AL353729.1-201ENST00000425044 720 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 HMGB1P27-201ENST00000431429 603 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 MTND1P32-201ENST00000433043 938 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 AC108059.3-201ENST00000456388 214 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN9O95484 AC128713.1-201ENST00000471495 306 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 RPL23AP41-201ENST00000484754 458 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN9O95484 RNU4-29P-201ENST00000515943 174 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 RPL7P20-201ENST00000520308 745 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 MTATP6P15-201ENST00000527233 835 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 AC021269.2-201ENST00000532318 330 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN9O95484 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
CLDN9O95484 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN9O95484 AC105137.2-201ENST00000569073 466 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 AC007151.1-201ENST00000572774 483 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 AL355472.4-201ENST00000610233 626 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 DUSP12P1-201ENST00000612874 516 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN9O95484 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
CLDN9O95484 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN9O95484 AC093536.2-201ENST00000565257 1406 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN9O95484 RNU6-1284P-201ENST00000363701 100 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 RNU6-658P-201ENST00000384606 106 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 MIR513B-201ENST00000385136 84 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 CR769767.1-201ENST00000436337 346 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 UBE2FP3-201ENST00000436366 524 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC010095.1-201ENST00000443543 144 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 FABP5P15-201ENST00000453566 214 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 LINC00888-204ENST00000487386 421 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN9O95484 RPF2P2-201ENST00000504693 896 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC023141.11-201ENST00000508864 202 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN9O95484 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLDN9O95484 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 SNORA31.6-201ENST00000516241 130 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 RNA5SP24-201ENST00000516478 95 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 EEF1A1P37-201ENST00000522748 715 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN9O95484 AC087241.2-201ENST00000535801 324 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 MIR3199-1-201ENST00000582434 88 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AL031281.1-201ENST00000604049 488 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AL355598.1-201ENST00000604169 202 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN9O95484 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC092106.3-201ENST00000611308 722 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC104237.2-201ENST00000612456 443 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 AC009159.1-201ENST00000618386 642 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLDN9O95484 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN9O95484 AP002791.1-201ENST00000623291 381 ntBASIC2.27□□□□□ -2.05
CLDN9O95484 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms