Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AP002963.1-201ENST00000530590 184 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.33□□□□□ -1.88
RTN3O95197 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN3O95197 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN3O95197 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.33□□□□□ -1.88
RTN3O95197 MIR3611-201ENST00000584484 83 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AC068790.2-201ENST00000602601 557 ntBASIC3.33□□□□□ -1.88
RTN3O95197 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN3O95197 AC022893.3-201ENST00000607665 437 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
RTN3O95197 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
RTN3O95197 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN3O95197 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTN3O95197 AC008669.1-201ENST00000565823 2178 ntBASIC3.33□□□□□ -1.88
RTN3O95197 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTN3O95197 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RTN3O95197 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN3O95197 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN3O95197 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTN3O95197 Y_RNA.22-201ENST00000362492 102 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.32□□□□□ -1.88
RTN3O95197 BMS1P22-201ENST00000414726 313 ntBASIC3.32□□□□□ -1.88
RTN3O95197 RPL7P10-201ENST00000417407 739 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AL109913.1-201ENST00000421173 514 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN3O95197 AL365496.1-201ENST00000426885 215 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC133104.1-201ENST00000429100 218 ntBASIC3.32□□□□□ -1.88
RTN3O95197 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN3O95197 RPL23AP30-201ENST00000432419 501 ntBASIC3.32□□□□□ -1.88
RTN3O95197 GPR143P-201ENST00000434155 205 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.32□□□□□ -1.88
RTN3O95197 AL671855.1-201ENST00000446875 1203 ntBASIC3.32□□□□□ -1.88
RTN3O95197 MTCO2P18-201ENST00000457151 658 ntBASIC3.32□□□□□ -1.88
RTN3O95197 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.32□□□□□ -1.88
RTN3O95197 AC114786.4-201ENST00000508771 728 ntBASIC3.32□□□□□ -1.88
RTN3O95197 RNU6-410P-201ENST00000517006 107 ntBASIC3.32□□□□□ -1.88
RTN3O95197 RNU6-430P-201ENST00000517078 107 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN3O95197 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTN3O95197 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN3O95197 AL359212.1-201ENST00000556608 614 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC005332.10-201ENST00000612725 619 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC008498.1-201ENST00000613012 531 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
RTN3O95197 SCARNA15.3-201ENST00000626315 122 ntBASIC3.32□□□□□ -1.88
RTN3O95197 SCARNA4.1-201ENST00000628597 123 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AP003399.1-201ENST00000637534 361 ntBASIC3.32□□□□□ -1.88
RTN3O95197 AC092447.7-201ENST00000422212 1621 ntBASIC3.32□□□□□ -1.88
RTN3O95197 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTN3O95197 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.31□□□□□ -1.88
RTN3O95197 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RTN3O95197 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTN3O95197 RNU1-105P-201ENST00000363470 161 ntBASIC3.31□□□□□ -1.88
RTN3O95197 SNORD15B-201ENST00000384714 146 ntBASIC3.31□□□□□ -1.88
RTN3O95197 NDUFS5P4-201ENST00000412983 318 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC080125.1-201ENST00000414888 684 ntBASIC3.31□□□□□ -1.88
RTN3O95197 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTN3O95197 AC104332.2-201ENST00000429959 156 ntBASIC3.31□□□□□ -1.88
RTN3O95197 MTCO3P5-201ENST00000433620 714 ntBASIC3.31□□□□□ -1.88
RTN3O95197 FABP5P13-201ENST00000452144 328 ntBASIC3.31□□□□□ -1.88
RTN3O95197 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
RTN3O95197 MRPS17P3-201ENST00000465453 385 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN3O95197 MTCO2P4-201ENST00000517968 247 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN3O95197 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.31□□□□□ -1.88
RTN3O95197 OR5B19P-201ENST00000531766 928 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN3O95197 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN3O95197 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN3O95197 HMGN2P15-201ENST00000585707 270 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC098848.2-201ENST00000588023 330 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AL355598.1-201ENST00000604169 202 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC098614.4-201ENST00000607601 462 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC100793.4-201ENST00000613683 429 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC130324.3-201ENST00000614165 542 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AL359547.2-201ENST00000615810 418 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC138649.3-201ENST00000622154 254 ntBASIC3.31□□□□□ -1.88
RTN3O95197 AC068880.5-201ENST00000624331 290 ntBASIC3.31□□□□□ -1.88
RTN3O95197 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTN3O95197 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
RTN3O95197 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTN3O95197 AL353743.1-202ENST00000431724 1695 ntBASIC3.3□□□□□ -1.88
RTN3O95197 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN3O95197 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN3O95197 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RTN3O95197 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.3□□□□□ -1.88
RTN3O95197 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTN3O95197 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTN3O95197 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN3O95197 MIR422A-201ENST00000362286 90 ntBASIC3.3□□□□□ -1.88
RTN3O95197 RNU6-108P-201ENST00000365558 107 ntBASIC3.3□□□□□ -1.88
RTN3O95197 Y_RNA.534-201ENST00000384599 112 ntBASIC3.3□□□□□ -1.88
RTN3O95197 MIR301A-201ENST00000385261 86 ntBASIC3.3□□□□□ -1.88
RTN3O95197 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
RTN3O95197 SNORA48.5-201ENST00000391143 135 ntBASIC3.3□□□□□ -1.88
RTN3O95197 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.3□□□□□ -1.88
RTN3O95197 RPL26P27-201ENST00000414397 437 ntBASIC3.3□□□□□ -1.88
RTN3O95197 HMGB1P9-201ENST00000429856 646 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms