Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPL17P50-201ENST00000396131 546 ntBASIC3.08□□□□□ -1.92
BEST1O76090 RNU2-39P-201ENST00000410604 198 ntBASIC3.08□□□□□ -1.92
BEST1O76090 RN7SKP142-201ENST00000411236 328 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 AC080125.1-201ENST00000414888 684 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AL109913.1-201ENST00000421173 514 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AL353729.1-201ENST00000425044 720 ntBASIC3.08□□□□□ -1.92
BEST1O76090 RPL23AP30-201ENST00000432419 501 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.08□□□□□ -1.92
BEST1O76090 AL022238.1-201ENST00000442557 355 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.08□□□□□ -1.92
BEST1O76090 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 RPS3AP14-201ENST00000483907 780 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.08□□□□□ -1.92
BEST1O76090 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 SEM1P1-201ENST00000506694 209 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 AC117522.1-201ENST00000509821 380 ntBASIC3.08□□□□□ -1.92
BEST1O76090 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
BEST1O76090 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AC068657.1-201ENST00000520807 306 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST1O76090 CYCSP39-201ENST00000565821 309 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST1O76090 AL137843.1-201ENST00000605078 385 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AL512643.1-201ENST00000635735 524 ntBASIC3.08□□□□□ -1.92
BEST1O76090 Z99571.1-201ENST00000636677 394 ntBASIC3.08□□□□□ -1.92
BEST1O76090 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
BEST1O76090 TEX21P-201ENST00000447107 1476 ntBASIC3.08□□□□□ -1.92
BEST1O76090 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST1O76090 MTND5P27-201ENST00000428871 1720 ntBASIC3.07□□□□□ -1.92
BEST1O76090 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
BEST1O76090 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
BEST1O76090 RNU6-169P-201ENST00000365336 107 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AL122016.1-201ENST00000403365 367 ntBASIC3.07□□□□□ -1.92
BEST1O76090 RNU6-248P-201ENST00000410720 107 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST1O76090 AC096649.2-201ENST00000416186 393 ntBASIC3.07□□□□□ -1.92
BEST1O76090 BRK1P2-201ENST00000442875 223 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AL135938.1-201ENST00000443141 297 ntBASIC3.07□□□□□ -1.92
BEST1O76090 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
BEST1O76090 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST1O76090 RPL21P41-201ENST00000459863 264 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AP001486.1-201ENST00000463339 476 ntBASIC3.07□□□□□ -1.92
BEST1O76090 RNU6-914P-201ENST00000516749 109 ntBASIC3.07□□□□□ -1.92
BEST1O76090 RN7SKP282-201ENST00000516824 299 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AP003122.3-201ENST00000526316 255 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AC084851.1-201ENST00000529105 249 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST1O76090 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST1O76090 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST1O76090 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.07□□□□□ -1.92
BEST1O76090 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST1O76090 AC110760.3-201ENST00000598794 467 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AC087752.4-201ENST00000605911 462 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AL161734.1-201ENST00000609720 557 ntBASIC3.07□□□□□ -1.92
BEST1O76090 AC130324.3-201ENST00000614165 542 ntBASIC3.07□□□□□ -1.92
BEST1O76090 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BEST1O76090 MIR3199-2-201ENST00000636243 86 ntBASIC3.07□□□□□ -1.92
BEST1O76090 MTND4P35-201ENST00000604257 1375 ntBASIC3.07□□□□□ -1.92
BEST1O76090 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.07□□□□□ -1.92
BEST1O76090 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
BEST1O76090 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
BEST1O76090 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST1O76090 Y_RNA.77-201ENST00000362962 107 ntBASIC3.06□□□□□ -1.92
BEST1O76090 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BEST1O76090 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
BEST1O76090 RNU6-750P-201ENST00000390946 107 ntBASIC3.06□□□□□ -1.92
BEST1O76090 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 ISCA1P6-201ENST00000427740 390 ntBASIC3.06□□□□□ -1.92
BEST1O76090 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.06□□□□□ -1.92
BEST1O76090 AC107083.1-201ENST00000439643 279 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST1O76090 AC025750.2-201ENST00000442609 450 ntBASIC3.06□□□□□ -1.92
BEST1O76090 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST1O76090 MTND1P27-201ENST00000451117 902 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
BEST1O76090 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AL049873.1-201ENST00000480540 376 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC096576.1-201ENST00000489014 359 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC139453.3-201ENST00000493276 369 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC109927.2-201ENST00000506416 303 ntBASIC3.06□□□□□ -1.92
BEST1O76090 HIGD1AP13-201ENST00000509878 289 ntBASIC3.06□□□□□ -1.92
BEST1O76090 Y_RNA.689-201ENST00000516589 107 ntBASIC3.06□□□□□ -1.92
BEST1O76090 SNORA18.6-201ENST00000516792 115 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
BEST1O76090 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
BEST1O76090 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
BEST1O76090 OR5B19P-201ENST00000531766 928 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST1O76090 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.06□□□□□ -1.92
BEST1O76090 AC010546.1-201ENST00000569391 485 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms