Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 U8.14-201ENST00000390843 143 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 RPS12P24-201ENST00000412619 387 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC092634.6-201ENST00000418558 192 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 EIF4EP4-201ENST00000424916 578 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.15□□□□□ -2.23
SNRNP200O75643 SUMO2P2-201ENST00000456482 255 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 snoU109.4-201ENST00000458953 143 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 RNU7-23P-201ENST00000459465 62 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.15□□□□□ -2.23
SNRNP200O75643 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 COX7A2P2-201ENST00000505291 250 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC008526.1-201ENST00000509149 338 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AF131216.2-201ENST00000512316 564 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.15□□□□□ -2.23
SNRNP200O75643 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 DEFB108D-201ENST00000527787 222 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC010186.2-204ENST00000537668 439 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.15□□□□□ -2.23
SNRNP200O75643 MIR4666A-201ENST00000580160 79 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC073413.2-201ENST00000604332 360 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC090132.2-201ENST00000615881 347 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.15□□□□□ -2.23
SNRNP200O75643 AL445493.3-201ENST00000619568 477 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SNRNP200O75643 AP000648.3-201ENST00000623539 4507 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 SNORA25.9-201ENST00000365087 128 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 Y_RNA.338-201ENST00000365320 114 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 FGF7P8-201ENST00000402994 292 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 RNU6-1328P-201ENST00000410938 106 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 RNA5SP247-201ENST00000411181 105 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 AP000275.1-201ENST00000411943 390 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 RPL31P54-201ENST00000429803 370 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.14□□□□□ -2.23
SNRNP200O75643 AC007000.2-201ENST00000442564 487 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 RAC1P7-201ENST00000445367 377 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 RPL23AP3-201ENST00000453844 468 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 AC112518.2-201ENST00000508565 425 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 AC084364.2-201ENST00000546924 395 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 AC008127.2-201ENST00000549925 1075 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 AC124947.2-202ENST00000552735 133 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 AC105245.1-201ENST00000581934 244 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.14□□□□□ -2.23
SNRNP200O75643 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.14□□□□□ -2.23
SNRNP200O75643 AL049641.1-201ENST00000441055 1948 ntBASIC1.14□□□□□ -2.23
SNRNP200O75643 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SNRNP200O75643 AC025263.3-201ENST00000622965 1396 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 Y_RNA.226-201ENST00000364337 114 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
SNRNP200O75643 RNU6-203P-201ENST00000384038 104 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 RNU6-441P-201ENST00000384545 106 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 MT-TC-201ENST00000387405 66 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AL133264.1-201ENST00000407157 562 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC087884.1-201ENST00000469738 328 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC004223.1-201ENST00000479840 271 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC147055.4-201ENST00000504399 745 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.13□□□□□ -2.23
SNRNP200O75643 MIR4637-201ENST00000582405 84 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 RN7SL622P-201ENST00000585292 275 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 MTND4LP5-201ENST00000605152 292 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC100814.1-201ENST00000606963 623 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC004067.1-201ENST00000608733 700 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC004520.1-201ENST00000608362 1413 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 SNORD56.4-201ENST00000363883 71 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 Y_RNA.548-201ENST00000384656 105 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC092473.1-201ENST00000441098 221 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 TAF9P1-201ENST00000445421 515 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 MRPL42P4-201ENST00000453267 443 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 TAF9P2-201ENST00000454958 515 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC091860.1-201ENST00000505723 432 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.13□□□□□ -2.23
SNRNP200O75643 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC006518.2-201ENST00000542513 940 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 LSM6P2-201ENST00000552208 177 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP200O75643 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.13□□□□□ -2.23
SNRNP200O75643 AC011939.3-201ENST00000613686 466 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 uc_338.12-201ENST00000616344 181 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC099842.1-201ENST00000619919 596 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 AC025048.6-202ENST00000627667 438 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.13□□□□□ -2.23
SNRNP200O75643 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
SNRNP200O75643 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
SNRNP200O75643 MIR514A1-201ENST00000385133 98 ntBASIC1.12□□□□□ -2.23
SNRNP200O75643 RPL7P27-201ENST00000403775 720 ntBASIC1.12□□□□□ -2.23
SNRNP200O75643 RNA5SP450-201ENST00000411206 102 ntBASIC1.12□□□□□ -2.23
SNRNP200O75643 AL161449.1-201ENST00000414531 1199 ntBASIC1.12□□□□□ -2.23
SNRNP200O75643 AL451054.2-201ENST00000420896 202 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms