Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC124016.2-201ENST00000610058 665 ntBASIC2.19□□□□□ -2.06
NPHP4O75161 AC243773.3-201ENST00000613270 256 ntBASIC2.19□□□□□ -2.06
NPHP4O75161 AC018926.1-201ENST00000616335 435 ntBASIC2.19□□□□□ -2.06
NPHP4O75161 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
NPHP4O75161 AC099654.7-201ENST00000635788 2127 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NPHP4O75161 RNU6-236P-201ENST00000363886 106 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 MIR627-201ENST00000384979 97 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 RNU2-25P-201ENST00000411041 191 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AC069282.1-201ENST00000411911 526 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.18□□□□□ -2.06
NPHP4O75161 AC018630.2-202ENST00000422992 927 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AC234781.2-201ENST00000426370 994 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.18□□□□□ -2.06
NPHP4O75161 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NPHP4O75161 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.18□□□□□ -2.06
NPHP4O75161 LARP1BP2-201ENST00000486594 519 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 RPL30P5-201ENST00000494923 336 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.18□□□□□ -2.06
NPHP4O75161 AC022483.1-201ENST00000514020 567 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AC112198.4-201ENST00000515450 351 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 RNU6-1256P-201ENST00000516539 103 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 MTCO1P47-201ENST00000523889 1271 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 DEFB130C-202ENST00000530001 230 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.18□□□□□ -2.06
NPHP4O75161 AC135279.1-201ENST00000543493 504 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.18□□□□□ -2.06
NPHP4O75161 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NPHP4O75161 AC009237.15-201ENST00000610252 501 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AL158163.2-201ENST00000619110 700 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AC012150.2-201ENST00000621300 544 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 AL133216.2-202ENST00000634512 349 ntBASIC2.18□□□□□ -2.06
NPHP4O75161 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.18□□□□□ -2.06
NPHP4O75161 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NPHP4O75161 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NPHP4O75161 Y_RNA.578-201ENST00000390903 88 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 BX119904.4-201ENST00000424402 301 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 TAAR7P-201ENST00000436141 242 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 GTF2IP7-202ENST00000436677 309 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP4O75161 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 HMGB1P28-201ENST00000507778 552 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC084851.1-201ENST00000529105 249 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NPHP4O75161 AP000943.4-201ENST00000622912 357 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC091895.1-201ENST00000624494 256 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
NPHP4O75161 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
NPHP4O75161 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP4O75161 RNU6-28P-201ENST00000362378 107 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 RNU1-22P-201ENST00000363334 158 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 SNORD48-201ENST00000364953 64 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NPHP4O75161 MIR514A1-201ENST00000385133 98 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC096533.1-201ENST00000411645 353 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC068533.2-201ENST00000411872 306 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP4O75161 USP9YP21-201ENST00000420603 432 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL365496.1-201ENST00000426885 215 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL512844.2-201ENST00000433990 593 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 SDCBPP1-201ENST00000440192 890 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 AC090515.1-201ENST00000465295 476 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC034222.1-201ENST00000494052 532 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 SUMO2P5-201ENST00000506790 245 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC093752.1-206ENST00000511823 336 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 RNU6-528P-201ENST00000516926 100 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 HSPA8P13-201ENST00000523715 472 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP4O75161 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP4O75161 AC092451.2-201ENST00000538746 658 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL137100.2-201ENST00000555786 315 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.17□□□□□ -2.06
NPHP4O75161 MIR3912-201ENST00000577566 105 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC090616.3-201ENST00000582184 217 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 RPL21P136-201ENST00000605378 396 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPHP4O75161 uc_338.12-201ENST00000616344 181 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AL596245.1-201ENST00000618994 362 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 UCA1.1-201ENST00000620952 75 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 AC109454.4-201ENST00000623411 649 ntBASIC2.17□□□□□ -2.06
NPHP4O75161 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.17□□□□□ -2.06
NPHP4O75161 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.17□□□□□ -2.06
NPHP4O75161 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP4O75161 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
NPHP4O75161 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPHP4O75161 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPHP4O75161 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPHP4O75161 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPHP4O75161 snoZ40.1-201ENST00000364540 72 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms