Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNU6-927P-201ENST00000516199 100 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RNU6-1003P-201ENST00000517099 105 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN1O60741 ATP5F1P5-201ENST00000526403 760 ntBASIC2.4□□□□□ -2.03
HCN1O60741 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.4□□□□□ -2.03
HCN1O60741 AC008015.1-201ENST00000555505 465 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AL158211.1-201ENST00000566763 763 ntBASIC2.4□□□□□ -2.03
HCN1O60741 HMGN2P15-201ENST00000585707 270 ntBASIC2.4□□□□□ -2.03
HCN1O60741 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.4□□□□□ -2.03
HCN1O60741 MTND4LP5-201ENST00000605152 292 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN1O60741 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN1O60741 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN1O60741 AC079416.3-201ENST00000624479 549 ntBASIC2.4□□□□□ -2.03
HCN1O60741 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.4□□□□□ -2.03
HCN1O60741 AL359693.1-201ENST00000614959 2407 ntBASIC2.4□□□□□ -2.03
HCN1O60741 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
HCN1O60741 RNU6-1072P-201ENST00000384703 107 ntBASIC2.39□□□□□ -2.03
HCN1O60741 RNU6-443P-201ENST00000384780 107 ntBASIC2.39□□□□□ -2.03
HCN1O60741 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HCN1O60741 RNU6-278P-201ENST00000390945 109 ntBASIC2.39□□□□□ -2.03
HCN1O60741 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AL139039.1-201ENST00000401900 692 ntBASIC2.39□□□□□ -2.03
HCN1O60741 RN7SKP284-201ENST00000411002 343 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC007064.1-201ENST00000412238 351 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.39□□□□□ -2.03
HCN1O60741 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.39□□□□□ -2.03
HCN1O60741 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC104389.3-201ENST00000445629 235 ntBASIC2.39□□□□□ -2.03
HCN1O60741 FTH1P25-201ENST00000447665 469 ntBASIC2.39□□□□□ -2.03
HCN1O60741 DPPA3P1-201ENST00000448050 469 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC126389.1-201ENST00000477436 290 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AL160314.1-201ENST00000490836 438 ntBASIC2.39□□□□□ -2.03
HCN1O60741 EIF4EP3-201ENST00000498782 656 ntBASIC2.39□□□□□ -2.03
HCN1O60741 SUMO2P6-201ENST00000505273 288 ntBASIC2.39□□□□□ -2.03
HCN1O60741 MTND1P22-201ENST00000510572 951 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.39□□□□□ -2.03
HCN1O60741 RNA5SP290-201ENST00000517133 127 ntBASIC2.39□□□□□ -2.03
HCN1O60741 RN7SKP258-201ENST00000517151 304 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.39□□□□□ -2.03
HCN1O60741 SUB1P1-201ENST00000524415 382 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.39□□□□□ -2.03
HCN1O60741 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.39□□□□□ -2.03
HCN1O60741 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.39□□□□□ -2.03
HCN1O60741 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
HCN1O60741 AC012435.1-202ENST00000568772 240 ntBASIC2.39□□□□□ -2.03
HCN1O60741 MIR3124-201ENST00000582636 67 ntBASIC2.39□□□□□ -2.03
HCN1O60741 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
HCN1O60741 MIR3616-201ENST00000584070 92 ntBASIC2.39□□□□□ -2.03
HCN1O60741 MTCYBP22-201ENST00000603788 447 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC103710.1-201ENST00000610003 901 ntBASIC2.39□□□□□ -2.03
HCN1O60741 MIR6817-201ENST00000615588 66 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC091304.6-201ENST00000619761 202 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC079248.2-201ENST00000623779 326 ntBASIC2.39□□□□□ -2.03
HCN1O60741 AC006927.3-201ENST00000638789 384 ntBASIC2.39□□□□□ -2.03
HCN1O60741 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HCN1O60741 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
HCN1O60741 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HCN1O60741 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HCN1O60741 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HCN1O60741 AL445523.1-201ENST00000451184 1362 ntBASIC2.38□□□□□ -2.03
HCN1O60741 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
HCN1O60741 RNU6-884P-201ENST00000363889 107 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AL445529.1-201ENST00000398713 389 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.38□□□□□ -2.03
HCN1O60741 GTF2IP20-201ENST00000431663 360 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AC118469.1-201ENST00000442943 488 ntBASIC2.38□□□□□ -2.03
HCN1O60741 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.38□□□□□ -2.03
HCN1O60741 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AC108059.3-201ENST00000456388 214 ntBASIC2.38□□□□□ -2.03
HCN1O60741 RNU7-125P-201ENST00000458760 62 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
HCN1O60741 RPL30P6-201ENST00000475925 342 ntBASIC2.38□□□□□ -2.03
HCN1O60741 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.38□□□□□ -2.03
HCN1O60741 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.38□□□□□ -2.03
HCN1O60741 AC109329.2-201ENST00000519658 482 ntBASIC2.38□□□□□ -2.03
HCN1O60741 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.38□□□□□ -2.03
HCN1O60741 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.38□□□□□ -2.03
HCN1O60741 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HCN1O60741 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HCN1O60741 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HCN1O60741 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HCN1O60741 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.38□□□□□ -2.03
HCN1O60741 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.38□□□□□ -2.03
HCN1O60741 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.38□□□□□ -2.03
HCN1O60741 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 PCMTD1P2-201ENST00000565017 355 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AC091489.2-201ENST00000566263 604 ntBASIC2.38□□□□□ -2.03
HCN1O60741 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.38□□□□□ -2.03
HCN1O60741 MIR3146-201ENST00000580367 79 ntBASIC2.38□□□□□ -2.03
HCN1O60741 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.38□□□□□ -2.03
HCN1O60741 NIFKP6-201ENST00000598115 845 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms