Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL353743.1-202ENST00000431724 1695 ntBASIC3.97□□□□□ -1.77
CTNND1O60716 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CTNND1O60716 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTNND1O60716 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTNND1O60716 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTNND1O60716 RNU6-512P-201ENST00000364438 103 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 UBA52P6-201ENST00000399822 382 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 MTCYBP8-201ENST00000422855 651 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 MRPS10P2-201ENST00000431226 381 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 SEPT14P3-201ENST00000439401 183 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AL732372.2-207ENST00000445840 183 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 DPPA3P1-201ENST00000448050 469 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AC073415.1-201ENST00000449240 153 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 ELOCP23-201ENST00000452014 332 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 SEPT14P2-201ENST00000453405 183 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AL162395.1-201ENST00000457882 422 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 KC877373.1-201ENST00000479066 408 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AC098591.2-201ENST00000510152 315 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 SEPT14P4-201ENST00000513445 186 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 RNA5SP401-201ENST00000515920 127 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 RNU6-1178P-201ENST00000516674 107 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 FO082796.1-201ENST00000523795 183 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AP005435.4-201ENST00000529514 284 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.96□□□□□ -1.78
CTNND1O60716 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.96□□□□□ -1.78
CTNND1O60716 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 AC092325.1-201ENST00000566449 554 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.96□□□□□ -1.78
CTNND1O60716 AP000907.4-201ENST00000604143 237 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AL670379.4-201ENST00000605279 254 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 AC104458.1-201ENST00000608243 463 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNND1O60716 SCARNA15.3-201ENST00000626315 122 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 SCARNA4.1-201ENST00000628597 123 ntBASIC3.96□□□□□ -1.78
CTNND1O60716 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.96□□□□□ -1.78
CTNND1O60716 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CTNND1O60716 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CTNND1O60716 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTNND1O60716 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTNND1O60716 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTNND1O60716 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.95□□□□□ -1.78
CTNND1O60716 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.95□□□□□ -1.78
CTNND1O60716 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 AC068647.1-201ENST00000489539 2265 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 AL139276.1-201ENST00000311910 1001 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 RNA5SP295-201ENST00000362655 121 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 Y_RNA.89-201ENST00000363031 102 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 Y_RNA.245-201ENST00000364493 95 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 RNU6-903P-201ENST00000391270 109 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AL391417.1-201ENST00000404100 426 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AP000567.1-201ENST00000406413 156 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 FAT1P1-201ENST00000406588 507 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC080125.1-201ENST00000414888 684 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC092047.1-201ENST00000424997 240 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 RPL7P46-201ENST00000425129 740 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 GTF2IP20-201ENST00000431663 360 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 Z82210.1-201ENST00000440037 231 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.95□□□□□ -1.78
CTNND1O60716 AL118520.1-201ENST00000450770 291 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 MTCO3P38-201ENST00000468910 766 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 RPL27AP5-201ENST00000469428 449 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC117522.3-201ENST00000507974 584 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 PCBP2P3-201ENST00000509726 843 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 RNU6-143P-201ENST00000516942 93 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.95□□□□□ -1.78
CTNND1O60716 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.95□□□□□ -1.78
CTNND1O60716 MIR4801-201ENST00000582704 82 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC073657.2-201ENST00000605661 303 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC002553.4-201ENST00000616896 331 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AF117829.1-206ENST00000621883 3802 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 YWHAEP7-203ENST00000622054 312 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 AC027309.3-201ENST00000623419 351 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.95□□□□□ -1.78
CTNND1O60716 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CTNND1O60716 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 AL049641.1-201ENST00000441055 1948 ntBASIC3.95□□□□□ -1.78
CTNND1O60716 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTNND1O60716 AC118273.1-201ENST00000525324 3006 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms