Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 AP006587.4-201ENST00000526053 529 ntBASIC2.98□□□□□ -1.93
PRKNO60260 OR5B19P-201ENST00000531766 928 ntBASIC2.98□□□□□ -1.93
PRKNO60260 HIF1AP1-201ENST00000553642 175 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AL355836.1-201ENST00000555951 870 ntBASIC2.98□□□□□ -1.93
PRKNO60260 MIR3186-201ENST00000577404 85 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 MIR4775-201ENST00000581168 75 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AC007619.2-201ENST00000605743 379 ntBASIC2.98□□□□□ -1.93
PRKNO60260 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.98□□□□□ -1.93
PRKNO60260 AC099778.2-201ENST00000610904 211 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AC024940.5-201ENST00000622889 474 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AC091953.5-201ENST00000622919 233 ntBASIC2.98□□□□□ -1.93
PRKNO60260 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.98□□□□□ -1.93
PRKNO60260 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PRKNO60260 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRKNO60260 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRKNO60260 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRKNO60260 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
PRKNO60260 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRKNO60260 MTND5P17-201ENST00000418405 1603 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AL672296.1-201ENST00000427780 2158 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC058791.1-201ENST00000608412 3198 ntBASIC2.97□□□□□ -1.93
PRKNO60260 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRKNO60260 RNU6-451P-201ENST00000362921 107 ntBASIC2.97□□□□□ -1.93
PRKNO60260 RNY3P3-201ENST00000363816 102 ntBASIC2.97□□□□□ -1.93
PRKNO60260 Y_RNA.255-201ENST00000364581 97 ntBASIC2.97□□□□□ -1.93
PRKNO60260 RNU6-1029P-201ENST00000384109 107 ntBASIC2.97□□□□□ -1.93
PRKNO60260 UBE2V1P2-201ENST00000397758 440 ntBASIC2.97□□□□□ -1.93
PRKNO60260 RN7SKP285-201ENST00000410137 318 ntBASIC2.97□□□□□ -1.93
PRKNO60260 RN7SKP140-201ENST00000411196 284 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRKNO60260 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AL139413.1-201ENST00000421309 217 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKNO60260 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKNO60260 RPL36AP6-201ENST00000435770 321 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
PRKNO60260 NEFMP1-201ENST00000443423 1006 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AC020550.1-201ENST00000447385 163 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKNO60260 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 FABP5P13-201ENST00000452144 328 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKNO60260 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKNO60260 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AL162395.1-201ENST00000457882 422 ntBASIC2.97□□□□□ -1.93
PRKNO60260 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC010401.1-201ENST00000463867 348 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AL163973.1-201ENST00000484753 577 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 SNORA31.8-201ENST00000516327 108 ntBASIC2.97□□□□□ -1.93
PRKNO60260 RNA5SP503-201ENST00000517047 117 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKNO60260 OR5BN1P-201ENST00000532955 829 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKNO60260 MIR5004-201ENST00000579078 107 ntBASIC2.97□□□□□ -1.93
PRKNO60260 UBL5P2-201ENST00000583788 219 ntBASIC2.97□□□□□ -1.93
PRKNO60260 BDH2P1-201ENST00000602288 736 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC008945.2-201ENST00000606056 604 ntBASIC2.97□□□□□ -1.93
PRKNO60260 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC091903.1-201ENST00000624322 454 ntBASIC2.97□□□□□ -1.93
PRKNO60260 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKNO60260 AC099654.14-201ENST00000638599 341 ntBASIC2.97□□□□□ -1.93
PRKNO60260 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKNO60260 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKNO60260 AC007496.3-201ENST00000624987 3443 ntBASIC2.97□□□□□ -1.93
PRKNO60260 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKNO60260 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
PRKNO60260 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PRKNO60260 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
PRKNO60260 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.96□□□□□ -1.93
PRKNO60260 AC004972.1-201ENST00000623934 2209 ntBASIC2.96□□□□□ -1.94
PRKNO60260 NACAP2-201ENST00000318548 624 ntBASIC2.96□□□□□ -1.94
PRKNO60260 DEFB108F-201ENST00000344638 222 ntBASIC2.96□□□□□ -1.94
PRKNO60260 Y_RNA.88-201ENST00000363029 99 ntBASIC2.96□□□□□ -1.94
PRKNO60260 Y_RNA.303-201ENST00000364998 94 ntBASIC2.96□□□□□ -1.94
PRKNO60260 RNU6-61P-201ENST00000365528 109 ntBASIC2.96□□□□□ -1.94
PRKNO60260 MIR514A1-201ENST00000385133 98 ntBASIC2.96□□□□□ -1.94
PRKNO60260 SNORD37.1-201ENST00000390968 65 ntBASIC2.96□□□□□ -1.94
PRKNO60260 OR9R1P-201ENST00000412200 877 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AL109913.1-201ENST00000421173 514 ntBASIC2.96□□□□□ -1.94
PRKNO60260 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.96□□□□□ -1.94
PRKNO60260 MTND1P18-201ENST00000448191 573 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AC073415.1-201ENST00000449240 153 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.96□□□□□ -1.94
PRKNO60260 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.96□□□□□ -1.94
PRKNO60260 HMGN1P18-201ENST00000457642 277 ntBASIC2.96□□□□□ -1.94
PRKNO60260 GMFBP1-201ENST00000467831 427 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AC109925.1-201ENST00000478069 331 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AC092436.1-201ENST00000506450 503 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms