Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF3O43395 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF3O43395 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF3O43395 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF3O43395 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF3O43395 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF3O43395 RNU6-512P-201ENST00000364438 103 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 Y_RNA.256-201ENST00000364594 104 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 SNORA69-201ENST00000383895 132 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 RNU6-483P-201ENST00000384088 108 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 Y_RNA.453-201ENST00000384223 109 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 MIR325-201ENST00000385260 98 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 PTMAP5-201ENST00000393073 333 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 RNA5SP118-201ENST00000410385 109 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 ARL5AP1-201ENST00000418991 388 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF3O43395 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 MTCO1P20-201ENST00000425366 358 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AC017083.1-201ENST00000428093 483 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AC073415.1-201ENST00000449240 153 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF3O43395 RPL23AP14-201ENST00000468281 468 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AL135752.1-201ENST00000479477 471 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AC092989.1-201ENST00000481235 277 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AC104136.1-201ENST00000512969 394 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF3O43395 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.95□□□□□ -1.78
PRPF3O43395 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.95□□□□□ -1.78
PRPF3O43395 AC092325.1-201ENST00000566449 554 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 MIR4425-201ENST00000580572 84 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 AC006557.5-201ENST00000603126 811 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 MIR15A-201ENST00000607334 83 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 RMST_8.1-201ENST00000610287 165 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 DISC2.1-201ENST00000612827 205 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 DUSP12P1-201ENST00000612874 516 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF3O43395 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF3O43395 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.95□□□□□ -1.78
PRPF3O43395 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PRPF3O43395 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF3O43395 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF3O43395 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
PRPF3O43395 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PRPF3O43395 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PRPF3O43395 MIR30E-201ENST00000362104 92 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 RNA5SP119-201ENST00000362715 117 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 RNA5SP111-201ENST00000411386 101 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 USP9YP6-201ENST00000413550 854 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 Z99755.1-201ENST00000414048 380 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 MTND1P23-201ENST00000416931 372 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AL160275.3-201ENST00000423876 471 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 RPL23AP82-202ENST00000427528 469 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 ELOCP23-201ENST00000452014 332 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AC004801.2-202ENST00000463559 283 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AC021205.2-201ENST00000480069 347 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 RN7SL293P-201ENST00000481765 281 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 MIR2276-201ENST00000516886 89 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AP003122.3-201ENST00000526316 255 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AC084851.1-201ENST00000529105 249 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF3O43395 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF3O43395 RNVU1-4-201ENST00000612985 164 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AL356321.1-201ENST00000621360 228 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 AL512643.1-201ENST00000635735 524 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 MTND5P7-201ENST00000413558 1798 ntBASIC3.94□□□□□ -1.78
PRPF3O43395 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF3O43395 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF3O43395 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF3O43395 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PRPF3O43395 RNU6-552P-201ENST00000362869 119 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 SNORD46.1-201ENST00000364139 104 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 SNORA70.4-201ENST00000365509 134 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 MIR490-201ENST00000384865 128 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 RNU6-550P-201ENST00000391057 101 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AL591416.1-201ENST00000404015 867 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF3O43395 RNU6-193P-201ENST00000410977 107 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF3O43395 HMGB1P9-201ENST00000429856 646 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms