Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.99□□□□□ -1.93
TO15178 ELOCP14-201ENST00000428070 331 ntBASIC2.99□□□□□ -1.93
TO15178 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.99□□□□□ -1.93
TO15178 GPM6BP2-201ENST00000432046 144 ntBASIC2.99□□□□□ -1.93
TO15178 AL451074.3-201ENST00000437709 472 ntBASIC2.99□□□□□ -1.93
TO15178 ELOCP7-201ENST00000439968 331 ntBASIC2.99□□□□□ -1.93
TO15178 DNAJC19P4-201ENST00000440115 345 ntBASIC2.99□□□□□ -1.93
TO15178 MTND1P1-201ENST00000445453 368 ntBASIC2.99□□□□□ -1.93
TO15178 GPM6BP1-201ENST00000446387 144 ntBASIC2.99□□□□□ -1.93
TO15178 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
TO15178 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
TO15178 FABP5P13-201ENST00000452144 328 ntBASIC2.99□□□□□ -1.93
TO15178 RN7SL807P-201ENST00000470923 297 ntBASIC2.99□□□□□ -1.93
TO15178 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.99□□□□□ -1.93
TO15178 SLC25A15P5-201ENST00000508033 253 ntBASIC2.99□□□□□ -1.93
TO15178 AC108078.2-201ENST00000510750 236 ntBASIC2.99□□□□□ -1.93
TO15178 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.99□□□□□ -1.93
TO15178 RNA5SP471-201ENST00000516971 106 ntBASIC2.99□□□□□ -1.93
TO15178 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.99□□□□□ -1.93
TO15178 AP001646.1-201ENST00000527936 915 ntBASIC2.99□□□□□ -1.93
TO15178 OR5B19P-201ENST00000531766 928 ntBASIC2.99□□□□□ -1.93
TO15178 AC022880.1-201ENST00000534017 973 ntBASIC2.99□□□□□ -1.93
TO15178 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
TO15178 MIR2682-201ENST00000580305 110 ntBASIC2.99□□□□□ -1.93
TO15178 MIR3944-201ENST00000581277 108 ntBASIC2.99□□□□□ -1.93
TO15178 AC020895.1-201ENST00000595362 272 ntBASIC2.99□□□□□ -1.93
TO15178 AC024220.1-201ENST00000603675 484 ntBASIC2.99□□□□□ -1.93
TO15178 BNIP3P9-201ENST00000603714 553 ntBASIC2.99□□□□□ -1.93
TO15178 AC012557.2-201ENST00000605919 418 ntBASIC2.99□□□□□ -1.93
TO15178 AC084782.3-201ENST00000612282 578 ntBASIC2.99□□□□□ -1.93
TO15178 AL359547.2-201ENST00000615810 418 ntBASIC2.99□□□□□ -1.93
TO15178 AL158209.2-201ENST00000619266 216 ntBASIC2.99□□□□□ -1.93
TO15178 AC098679.4-201ENST00000624241 654 ntBASIC2.99□□□□□ -1.93
TO15178 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.99□□□□□ -1.93
TO15178 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TO15178 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TO15178 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TO15178 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TO15178 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TO15178 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TO15178 AL359693.1-201ENST00000614959 2407 ntBASIC2.98□□□□□ -1.93
TO15178 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TO15178 Y_RNA.1-201ENST00000352915 104 ntBASIC2.98□□□□□ -1.93
TO15178 RNU6-1120P-201ENST00000362988 108 ntBASIC2.98□□□□□ -1.93
TO15178 RNU6-512P-201ENST00000364438 103 ntBASIC2.98□□□□□ -1.93
TO15178 Y_RNA.367-201ENST00000365544 101 ntBASIC2.98□□□□□ -1.93
TO15178 RNU6-217P-201ENST00000384164 104 ntBASIC2.98□□□□□ -1.93
TO15178 MIR1-2-201ENST00000384961 85 ntBASIC2.98□□□□□ -1.93
TO15178 AL357075.1-201ENST00000404107 726 ntBASIC2.98□□□□□ -1.93
TO15178 RNU4-55P-201ENST00000410731 137 ntBASIC2.98□□□□□ -1.93
TO15178 RNU6-387P-201ENST00000411331 105 ntBASIC2.98□□□□□ -1.93
TO15178 MTATP6P18-201ENST00000417994 673 ntBASIC2.98□□□□□ -1.93
TO15178 AL109913.1-201ENST00000421173 514 ntBASIC2.98□□□□□ -1.93
TO15178 HMGN2P30-201ENST00000423237 256 ntBASIC2.98□□□□□ -1.93
TO15178 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.98□□□□□ -1.93
TO15178 AL591212.2-201ENST00000433923 257 ntBASIC2.98□□□□□ -1.93
TO15178 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.98□□□□□ -1.93
TO15178 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TO15178 Z75741.1-201ENST00000446793 314 ntBASIC2.98□□□□□ -1.93
TO15178 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.98□□□□□ -1.93
TO15178 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.98□□□□□ -1.93
TO15178 RPL9P6-201ENST00000492764 598 ntBASIC2.98□□□□□ -1.93
TO15178 Y_RNA.689-201ENST00000516589 107 ntBASIC2.98□□□□□ -1.93
TO15178 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.98□□□□□ -1.93
TO15178 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.98□□□□□ -1.93
TO15178 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TO15178 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TO15178 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.98□□□□□ -1.93
TO15178 AL359212.1-201ENST00000556608 614 ntBASIC2.98□□□□□ -1.93
TO15178 EIF1P4-201ENST00000572664 335 ntBASIC2.98□□□□□ -1.93
TO15178 AC006504.3-201ENST00000586818 523 ntBASIC2.98□□□□□ -1.93
TO15178 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.98□□□□□ -1.93
TO15178 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.98□□□□□ -1.93
TO15178 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.98□□□□□ -1.93
TO15178 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
TO15178 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
TO15178 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
TO15178 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TO15178 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TO15178 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
TO15178 RNU6-198P-201ENST00000384258 104 ntBASIC2.97□□□□□ -1.93
TO15178 MIR454-201ENST00000390180 115 ntBASIC2.97□□□□□ -1.93
TO15178 RNA5SP44-201ENST00000410446 133 ntBASIC2.97□□□□□ -1.93
TO15178 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TO15178 AC063979.1-201ENST00000415539 377 ntBASIC2.97□□□□□ -1.93
TO15178 ISCA1P1-201ENST00000426679 387 ntBASIC2.97□□□□□ -1.93
TO15178 AL451062.2-201ENST00000427515 271 ntBASIC2.97□□□□□ -1.93
TO15178 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.97□□□□□ -1.93
TO15178 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.97□□□□□ -1.93
TO15178 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
TO15178 RPL7P49-201ENST00000471402 708 ntBASIC2.97□□□□□ -1.93
TO15178 AC109925.1-201ENST00000478069 331 ntBASIC2.97□□□□□ -1.93
TO15178 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.97□□□□□ -1.93
TO15178 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.97□□□□□ -1.93
TO15178 SNORD27.1-201ENST00000516319 72 ntBASIC2.97□□□□□ -1.93
TO15178 RNU6-928P-201ENST00000516876 104 ntBASIC2.97□□□□□ -1.93
TO15178 SNORA31.21-201ENST00000517180 77 ntBASIC2.97□□□□□ -1.93
TO15178 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.97□□□□□ -1.93
TO15178 AC007536.1-201ENST00000533382 349 ntBASIC2.97□□□□□ -1.93
TO15178 ADI1P3-201ENST00000549509 470 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms