Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 AC136443.5-201ENST00000603741 370 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM38O00635 AC091953.5-201ENST00000622919 233 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 AC134503.1-201ENST00000633048 54 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
TRIM38O00635 CUL1P1-201ENST00000509510 2425 ntBASIC3.76□□□□□ -1.81
TRIM38O00635 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM38O00635 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRIM38O00635 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM38O00635 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 Y_RNA.157-201ENST00000363638 102 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 SNORA9-201ENST00000384215 133 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 RNU6-463P-201ENST00000384340 107 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 Y_RNA.474-201ENST00000384341 102 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 MIR183-201ENST00000384958 110 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 MIR34B-201ENST00000385076 84 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 Z85995.1-201ENST00000415547 335 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 HSPD1P21-201ENST00000436541 245 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 PRDX3P3-201ENST00000447765 522 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM38O00635 TRBV12-2-201ENST00000489763 344 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AC021146.2-201ENST00000504736 556 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM38O00635 SNORA19.2-201ENST00000516013 114 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 RNU6-835P-201ENST00000516974 104 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 RNU6-1220P-201ENST00000517126 108 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 HMGB1P41-201ENST00000520234 440 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AP006587.4-201ENST00000526053 529 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 OR5B19P-201ENST00000531766 928 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM38O00635 NCAPGP2-201ENST00000557911 754 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AC090877.1-201ENST00000561418 344 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 AC034105.3-201ENST00000565294 442 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 AC009570.1-201ENST00000609599 745 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM38O00635 AC096577.2-201ENST00000611455 153 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM38O00635 AC024940.5-201ENST00000622889 474 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 U6.105-201ENST00000637379 88 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 MTND5P16-201ENST00000460269 1703 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
TRIM38O00635 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 AP001148.1-201ENST00000624124 2359 ntBASIC3.75□□□□□ -1.81
TRIM38O00635 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM38O00635 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM38O00635 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TRIM38O00635 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM38O00635 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM38O00635 AC022336.2-201ENST00000568966 2538 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM38O00635 Y_RNA.22-201ENST00000362492 102 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 Y_RNA.184-201ENST00000363884 108 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 RNU6-1322P-201ENST00000364309 107 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 SNORD6-201ENST00000365444 73 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM38O00635 Y_RNA.481-201ENST00000384373 102 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRIM38O00635 RN7SKP32-201ENST00000410167 303 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 RNU2-33P-201ENST00000410344 192 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 RNU2-39P-201ENST00000410604 198 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 RNU6-1148P-201ENST00000410992 104 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM38O00635 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM38O00635 TMEM167AP1-201ENST00000423409 219 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 MTCO3P46-201ENST00000425787 232 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM38O00635 SEPT14P3-201ENST00000439401 183 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM38O00635 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM38O00635 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM38O00635 AL732372.2-207ENST00000445840 183 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 SEPT14P2-201ENST00000453405 183 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 AC106707.2-201ENST00000484182 374 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM38O00635 SEPT14P4-201ENST00000513445 186 ntBASIC3.74□□□□□ -1.81
TRIM38O00635 RNA5SP291-201ENST00000517222 105 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms