Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 GMFBP1-201ENST00000467831 427 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AL135752.1-201ENST00000479477 471 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RPL30P14-201ENST00000482744 348 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RPS15AP34-201ENST00000487776 387 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AC091951.2-201ENST00000500762 203 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 AC006445.2-201ENST00000510061 472 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RNU1-95P-201ENST00000516357 160 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RNU1-128P-201ENST00000516704 160 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RN7SKP219-201ENST00000516825 296 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RNU6-928P-201ENST00000516876 104 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 RNU6-835P-201ENST00000516974 104 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 CBX3P7-201ENST00000532876 502 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXN3O00409 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXN3O00409 AC174048.1-201ENST00000603389 144 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AP001486.3-201ENST00000615334 372 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AC068831.7-201ENST00000616954 363 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXN3O00409 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXN3O00409 FAM35BP-202ENST00000497389 3337 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 ZNF285B-201ENST00000561698 1767 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXN3O00409 AL049641.1-201ENST00000441055 1948 ntBASIC3.76□□□□□ -1.81
FOXN3O00409 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
FOXN3O00409 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
FOXN3O00409 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXN3O00409 TPTE2P4-201ENST00000258589 1605 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 RNU1-101P-201ENST00000391171 127 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 FGF7P8-201ENST00000402994 292 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AL606923.1-201ENST00000406616 190 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AC012498.1-201ENST00000424037 437 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 MTND4P28-201ENST00000426217 387 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXN3O00409 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXN3O00409 SNRPFP3-201ENST00000457792 225 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXN3O00409 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 AC117522.3-201ENST00000507974 584 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AC046134.1-201ENST00000514454 666 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 RNU6-358P-201ENST00000516564 75 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXN3O00409 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.75□□□□□ -1.81
FOXN3O00409 HIF1AP1-201ENST00000553642 175 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 AC060780.3-201ENST00000589464 80 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXN3O00409 AL356055.1-201ENST00000602528 446 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 AL138889.2-201ENST00000603883 242 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AC024940.5-201ENST00000622889 474 ntBASIC3.75□□□□□ -1.81
FOXN3O00409 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXN3O00409 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
FOXN3O00409 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXN3O00409 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXN3O00409 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXN3O00409 MAPK10-362ENST00000641864 4484 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AC090740.1-201ENST00000623193 2262 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXN3O00409 AC103710.2-202ENST00000641454 2853 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
FOXN3O00409 MIR30E-201ENST00000362104 92 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
FOXN3O00409 RNU6-140P-201ENST00000384566 108 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 RNU6-903P-201ENST00000391270 109 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AL354719.1-201ENST00000406535 843 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AL356776.1-201ENST00000406574 447 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXN3O00409 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXN3O00409 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXN3O00409 AL160275.3-201ENST00000423876 471 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXN3O00409 CALM2P2-201ENST00000428512 440 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AC104058.1-201ENST00000448028 297 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 HMGB3P8-201ENST00000449709 577 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 RPL12P25-201ENST00000455592 494 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 EIF4EP3-201ENST00000498782 656 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AC018710.1-201ENST00000506509 158 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXN3O00409 RNA5SP165-201ENST00000517142 115 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXN3O00409 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.74□□□□□ -1.81
FOXN3O00409 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXN3O00409 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXN3O00409 TGIF1P1-201ENST00000558095 802 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.74□□□□□ -1.81
FOXN3O00409 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXN3O00409 AC004805.2-201ENST00000605382 482 ntBASIC3.74□□□□□ -1.81
FOXN3O00409 RNVU1-4-201ENST00000612985 164 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms