Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL591212.2-201ENST00000433923 257 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 SNRPFP4-201ENST00000456366 242 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 RPS29P26-201ENST00000477483 171 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 RPL23AP70-201ENST00000483361 460 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 AC139453.3-201ENST00000493276 369 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC010486.2-201ENST00000505572 483 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 NDUFB4P2-201ENST00000509515 391 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 AC098591.2-201ENST00000510152 315 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 RNU6-703P-201ENST00000516946 107 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AP003122.4-201ENST00000530980 758 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC135628.1-201ENST00000568867 534 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC28A1O00337 HMGN1P30-201ENST00000589286 268 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 BNIP3P33-201ENST00000598912 569 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC28A1O00337 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC28A1O00337 AL512643.1-201ENST00000635735 524 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 AC099654.13-201ENST00000639774 207 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC28A1O00337 AC010889.1-201ENST00000566193 2666 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC28A1O00337 ADAM3A-203ENST00000461344 2157 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 MAPK10-266ENST00000641066 6555 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 MTND4P35-201ENST00000604257 1375 ntBASIC2.6□□□□□ -1.99
SLC28A1O00337 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SLC28A1O00337 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC28A1O00337 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SLC28A1O00337 NACAP2-201ENST00000318548 624 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 SNORD56.2-201ENST00000363242 71 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 RNU6-188P-201ENST00000364207 107 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC28A1O00337 RNU6-946P-201ENST00000383878 107 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AL589872.1-201ENST00000426602 288 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 RPS15AP7-201ENST00000439294 405 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 DPPA3P1-201ENST00000448050 469 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AC093899.1-201ENST00000457984 376 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 SLC25A15P5-201ENST00000508033 253 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 Y_RNA.672-201ENST00000516289 104 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AC022080.3-201ENST00000544433 482 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 RPL21P5-201ENST00000554662 472 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC28A1O00337 AC109446.2-201ENST00000567872 497 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 MIR548AB-201ENST00000584917 84 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AC026790.2-201ENST00000606282 430 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AL392048.1-201ENST00000613946 534 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 AC120349.3-201ENST00000624377 529 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 Z99571.1-201ENST00000636677 394 ntBASIC2.59□□□□□ -1.99
SLC28A1O00337 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SLC28A1O00337 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.59□□□□□ -2
SLC28A1O00337 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.59□□□□□ -2
SLC28A1O00337 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -2
SLC28A1O00337 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.58□□□□□ -2
SLC28A1O00337 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
SLC28A1O00337 RNU4-1-201ENST00000363925 141 ntBASIC2.58□□□□□ -2
SLC28A1O00337 SET-203ENST00000372688 801 ntTSL 2 BASIC2.58□□□□□ -2
SLC28A1O00337 UBA52P6-201ENST00000399822 382 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AL049545.1-201ENST00000401856 572 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.58□□□□□ -2
SLC28A1O00337 ELOCP4-201ENST00000420090 333 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.58□□□□□ -2
SLC28A1O00337 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SLC28A1O00337 AC007283.2-201ENST00000424739 197 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.58□□□□□ -2
SLC28A1O00337 AL445567.1-201ENST00000439121 144 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.58□□□□□ -2
SLC28A1O00337 OSTCP8-201ENST00000445117 448 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.58□□□□□ -2
SLC28A1O00337 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
SLC28A1O00337 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.58□□□□□ -2
SLC28A1O00337 SCARNA17.1-201ENST00000516211 143 ntBASIC2.58□□□□□ -2
SLC28A1O00337 SCARNA17.2-201ENST00000516334 143 ntBASIC2.58□□□□□ -2
SLC28A1O00337 HMGB1P41-201ENST00000520234 440 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.58□□□□□ -2
SLC28A1O00337 AP003122.3-201ENST00000526316 255 ntBASIC2.58□□□□□ -2
SLC28A1O00337 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC084851.1-201ENST00000529105 249 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC007151.1-201ENST00000572774 483 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC174048.1-201ENST00000603389 144 ntBASIC2.58□□□□□ -2
SLC28A1O00337 RPL23AP88-201ENST00000605759 454 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AP002360.4-201ENST00000606980 481 ntBASIC2.58□□□□□ -2
SLC28A1O00337 AC022893.3-201ENST00000607665 437 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms