Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.84□□□□□ -2.11
UPK1AO00322 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1AO00322 NANOGP2-201ENST00000435391 727 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 AC098831.1-201ENST00000440661 216 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 AL358794.1-201ENST00000445689 381 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 EEF1E1P1-201ENST00000446998 430 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 USP9YP10-201ENST00000454868 628 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC090515.1-201ENST00000465295 476 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC104982.1-201ENST00000478775 574 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 AC022493.1-201ENST00000492984 337 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 RPS27AP10-201ENST00000496103 208 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 RNU6-927P-201ENST00000516199 100 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1AO00322 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1AO00322 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.84□□□□□ -2.11
UPK1AO00322 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 AC024619.4-201ENST00000580924 316 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 BNIP3P31-201ENST00000604515 566 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC025588.2-201ENST00000604851 466 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1AO00322 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1AO00322 AL138960.2-201ENST00000625145 535 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 MTND5P29-201ENST00000458676 1807 ntBASIC1.84□□□□□ -2.12
UPK1AO00322 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
UPK1AO00322 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
UPK1AO00322 Y_RNA.465-201ENST00000384293 102 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 MIR218-1-201ENST00000384999 110 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 RNU6-220P-201ENST00000390919 107 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 RNU6-920P-201ENST00000410926 92 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 RNU6-1328P-201ENST00000410938 106 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 MTCO1P17-201ENST00000411522 491 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 RPL26P27-201ENST00000414397 437 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC083875.1-201ENST00000419509 405 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.83□□□□□ -2.12
UPK1AO00322 ELOCP14-201ENST00000428070 331 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UPK1AO00322 ELOCP7-201ENST00000439968 331 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 EEF1A1P39-201ENST00000440791 250 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.83□□□□□ -2.12
UPK1AO00322 PSPHP1-201ENST00000450062 261 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 CECR9-201ENST00000453421 199 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.83□□□□□ -2.12
UPK1AO00322 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 AL121769.1-201ENST00000469473 401 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 RPL23AP94-201ENST00000512518 302 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.83□□□□□ -2.12
UPK1AO00322 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.83□□□□□ -2.12
UPK1AO00322 MTCO2P15-201ENST00000532655 656 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC023538.1-201ENST00000534576 736 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC093012.1-202ENST00000549403 582 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 YWHAZP1-201ENST00000556286 722 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 ANP32BP3-201ENST00000559213 706 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 MIR4648-201ENST00000580107 72 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1AO00322 AC004908.2-201ENST00000609090 574 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC025594.3-201ENST00000613068 790 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 AC112204.3-201ENST00000623822 332 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1AO00322 MIR7157-201ENST00000635801 60 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 ADAM3A-203ENST00000461344 2157 ntBASIC1.83□□□□□ -2.12
UPK1AO00322 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
UPK1AO00322 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1AO00322 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1AO00322 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UPK1AO00322 AL136310.1-201ENST00000404926 654 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 RNU2-68P-201ENST00000410878 191 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1AO00322 AC010153.1-201ENST00000432862 727 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 RPS25P9-201ENST00000435591 252 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 MTND1P28-201ENST00000435623 950 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 MTCO1P53-201ENST00000441633 699 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1AO00322 ELOCP30-201ENST00000447108 299 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1AO00322 AC020550.1-201ENST00000447385 163 ntBASIC1.82□□□□□ -2.12
UPK1AO00322 RPL21P134-201ENST00000453468 483 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms