Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC010486.3-201ENST00000511602 785 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC091965.2-201ENST00000512324 613 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MRPS36P2-201ENST00000512569 299 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC188H7C350 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC188H7C350 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC188H7C350 NACAP3-201ENST00000552100 481 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR3670-2-201ENST00000582974 65 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR3670-1-201ENST00000584160 65 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR4298-201ENST00000584380 73 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR3670-3-201ENST00000584855 65 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC188H7C350 AL358072.1-201ENST00000604156 575 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC025811.1-201ENST00000604312 472 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 OR2AS2P-201ENST00000606902 342 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC013562.2-201ENST00000611632 603 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AL359198.2-201ENST00000611836 194 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR3670-4-201ENST00000612260 65 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 DUSP12P1-201ENST00000612874 516 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC025594.3-201ENST00000613068 790 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AC090617.7-201ENST00000623952 126 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR3199-2-201ENST00000636243 86 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 Z99571.1-201ENST00000636677 394 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MIR3974-201ENST00000637126 96 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 U6.99-201ENST00000637524 83 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC188H7C350 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC188H7C350 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC188H7C350 MTND4P35-201ENST00000604257 1375 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC188H7C350 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC188H7C350 RNA5SP267-201ENST00000364893 126 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 RNU1-73P-201ENST00000383971 164 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AL139397.2-201ENST00000404529 772 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 RN7SKP142-201ENST00000411236 328 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC188H7C350 RPL7P37-201ENST00000425095 738 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AL358075.3-201ENST00000426289 226 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 ISCA1P6-201ENST00000427740 390 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC188H7C350 HMGB3P12-201ENST00000438745 556 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 MTND6P13-201ENST00000443510 523 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 FABP5P15-201ENST00000453566 214 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AC126182.1-201ENST00000478134 357 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 RPL39P36-201ENST00000490784 156 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AC119751.5-201ENST00000514077 770 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 Vault.3-201ENST00000516676 95 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC188H7C350 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AL359212.1-201ENST00000556608 614 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC005771.1-201ENST00000585581 349 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC022893.3-201ENST00000607665 437 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AC131902.3-201ENST00000611767 581 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 AL365204.3-201ENST00000612448 685 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 MTND5P42-201ENST00000637720 498 ntBASIC2.89□□□□□ -1.95
CCDC188H7C350 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC188H7C350 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC188H7C350 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC188H7C350 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC188H7C350 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC188H7C350 AL137003.2-201ENST00000606924 2538 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC188H7C350 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC188H7C350 MIR301A-201ENST00000385261 86 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 SNORA48.5-201ENST00000391143 135 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 RPS3AP36-201ENST00000398190 775 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 AC090960.1-201ENST00000421072 306 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 ISCA1P1-201ENST00000426679 387 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AL365496.1-201ENST00000426885 215 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 RPL23AP30-201ENST00000432419 501 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 SETP8-201ENST00000435341 628 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC188H7C350 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 RPS27AP8-201ENST00000452665 445 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 BX510359.1-201ENST00000456973 237 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 AC006445.1-201ENST00000491925 405 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC188H7C350 RPS27AP10-201ENST00000496103 208 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 HSPD1P15-201ENST00000505573 1122 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 Y_RNA.695-201ENST00000516715 107 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC188H7C350 AC010620.2-201ENST00000600135 313 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 Z94722.1-201ENST00000604328 474 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AC005000.2-201ENST00000605468 310 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms