Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RANP3-201ENST00000530970 276 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 ACTR3BP3-201ENST00000565577 979 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC105137.2-201ENST00000569073 466 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC011451.2-201ENST00000604303 598 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 NUTF2P8-201ENST00000604593 363 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC007494.3-201ENST00000624660 743 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 PABPC1P9-201ENST00000426076 1612 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC012321.1-201ENST00000561622 1588 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC006020.1-201ENST00000420179 1854 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL445523.1-201ENST00000451184 1362 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR19A-201ENST00000384878 82 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 U3.20-201ENST00000390909 217 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPS20P2-201ENST00000402520 389 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNA5SP38-201ENST00000410750 119 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL359704.1-201ENST00000411586 781 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPS27AP14-201ENST00000422868 454 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPL37P21-201ENST00000435890 276 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL049734.2-201ENST00000441066 616 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 TPT1P14-201ENST00000448018 505 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 snoU13.23-201ENST00000458863 104 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC034222.1-201ENST00000494052 532 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC087241.2-201ENST00000535801 324 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC012435.1-202ENST00000568772 240 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR5697-201ENST00000578045 78 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC060771.1-201ENST00000582031 164 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR5007-201ENST00000583098 95 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC110760.3-201ENST00000598794 467 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC091965.4-201ENST00000607691 587 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC108747.1-201ENST00000609508 535 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC034102.8-201ENST00000615146 484 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL603758.1-201ENST00000618654 241 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AF246928.1-201ENST00000623768 87 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC068057.2-201ENST00000624047 895 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL160394.1-201ENST00000624765 724 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 CU459211.1-201ENST00000635667 749 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC011460.1-201ENST00000636268 1834 ntBASIC2.26□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC002543.1-201ENST00000299783 1954 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-501P-201ENST00000364072 100 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-1078P-201ENST00000364522 103 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 U8.14-201ENST00000390843 143 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTND1P21-201ENST00000412991 285 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 CYCSP46-201ENST00000423569 204 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL031659.1-201ENST00000447075 539 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTND1P9-201ENST00000453775 944 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 MLLT10P2-201ENST00000506434 249 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 CDC42P4-201ENST00000510507 563 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 DEFB108D-201ENST00000527787 222 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 PCMTD1P2-201ENST00000565017 355 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC105224.1-201ENST00000587055 421 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC012065.4-201ENST00000602445 679 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC121247.2-201ENST00000604776 136 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC092354.1-201ENST00000606057 376 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL031775.1-201ENST00000607014 887 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL161734.1-201ENST00000609720 557 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC090132.2-201ENST00000615881 347 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC092140.2-201ENST00000618027 521 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC095031.1-201ENST00000623685 672 ntBASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TMX2-CTNND1H3BSU7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms