Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL049779.4-201ENST00000604500 156 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AL355297.2-201ENST00000604792 129 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AL109618.2-201ENST00000605527 211 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC138749.5-201ENST00000611461 208 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AL359547.2-201ENST00000615810 418 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC116165.2-201ENST00000616705 206 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC138627.2-201ENST00000624202 601 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 RNU2-63P-201ENST00000410792 194 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 MTCO2P17-201ENST00000424336 677 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC122718.1-201ENST00000439448 744 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC022493.1-201ENST00000492984 337 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 RNU7-193P-201ENST00000516723 65 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-1220P-201ENST00000517126 108 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 ADI1P3-201ENST00000549509 470 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC008015.1-201ENST00000555505 465 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 MIR4276-201ENST00000584832 70 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AL020991.1-201ENST00000612314 373 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC100793.4-201ENST00000613683 429 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC244517.12-201ENST00000623581 663 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC012640.5-201ENST00000623897 319 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 AC010297.1-201ENST00000623948 149 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HMGB1P1B2RPK0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 OR5J1P-201ENST00000313544 939 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 RNU1-72P-201ENST00000362976 153 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 RNA5SP515-201ENST00000364570 118 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 CYCSP19-201ENST00000411715 316 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC138623.1-201ENST00000418060 216 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 RPS27AP9-201ENST00000477681 438 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 RPS3AP43-201ENST00000479743 781 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 RPL9P33-201ENST00000484311 566 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC005178.1-201ENST00000508392 440 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC114781.4-201ENST00000513707 639 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 MIR4446-201ENST00000578505 67 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 WISP1-OT1-201ENST00000602893 642 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 AC012409.4-201ENST00000612923 249 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 FO624990.1-201ENST00000636373 85 ntBASIC3.09□□□□□ -1.91
HMGB1P1B2RPK0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HMGB1P1B2RPK0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.09□□□□□ -1.92
HMGB1P1B2RPK0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 RNU1-148P-201ENST00000384472 162 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 U3.37-201ENST00000408528 213 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 RNU6-628P-201ENST00000410675 107 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AL365338.1-201ENST00000422282 858 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC008526.1-201ENST00000509149 338 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC112206.3-201ENST00000514578 389 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 Y_RNA.672-201ENST00000516289 104 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC022878.1-201ENST00000530684 149 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC079598.5-201ENST00000547460 117 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 RPL21P5-201ENST00000554662 472 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 RPL21P12-201ENST00000559810 515 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AL138976.2-201ENST00000563989 694 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 MTCYBP33-201ENST00000575007 1130 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC068276.1-201ENST00000605793 379 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 MIR5739-201ENST00000619803 80 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC010338.1-201ENST00000621823 717 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AF246928.1-201ENST00000623768 87 ntBASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AC099654.13-201ENST00000639774 207 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms