Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 MIR4287-201ENST00000579398 78 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 AC103810.9-201ENST00000606688 112 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
COL6A5A8TX70 RNY4P7-201ENST00000364600 96 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 Y_RNA.514-201ENST00000384528 112 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 RPS29P28-201ENST00000446439 141 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 RNU1-98P-201ENST00000458992 160 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 NAP1L1P3-201ENST00000462291 880 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 Y_RNA.684-201ENST00000516510 99 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 HMGB1P17-201ENST00000403495 628 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC004022.2-201ENST00000413824 193 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A5A8TX70 AL353689.1-201ENST00000438895 199 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC098591.2-201ENST00000510152 315 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 RNA5SP468-201ENST00000516782 93 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A5A8TX70 AL109918.3-201ENST00000603072 338 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AP000654.2-201ENST00000605633 586 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC005332.10-201ENST00000612725 619 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC145207.9-201ENST00000623802 325 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL6A5A8TX70 Y_RNA.495-201ENST00000384435 112 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 SFR1P1-201ENST00000403720 688 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 RN7SKP142-201ENST00000411236 328 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 MTND5P25-201ENST00000430499 799 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A5A8TX70 C1DP3-201ENST00000455013 423 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL6A5A8TX70 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
COL6A5A8TX70 Y_RNA.659-201ENST00000515994 113 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 SNORA48.11-201ENST00000517015 89 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.61□□□□□ -2.31
COL6A5A8TX70 OR4G3P-201ENST00000633500 913 ntBASIC0.61□□□□□ -2.31
COL6A5A8TX70 RNA5SP299-201ENST00000391203 116 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC068050.1-201ENST00000394891 380 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 RPL31P52-201ENST00000407532 367 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
COL6A5A8TX70 RNU7-26P-201ENST00000458980 63 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 RPS20P20-201ENST00000460498 340 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 LSM6P2-201ENST00000552208 177 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 MTCYBP23-201ENST00000558717 1102 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 UBE2L4-201ENST00000587688 464 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC097372.5-201ENST00000623665 376 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 MTCO1P23-201ENST00000415223 1526 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 RNA5SP276-201ENST00000362580 94 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 RNU6-942P-201ENST00000363002 107 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 MIR92A2-201ENST00000385299 75 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC069277.2-201ENST00000454211 432 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.6□□□□□ -2.31
COL6A5A8TX70 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC008676.3-201ENST00000521237 435 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC073569.3-201ENST00000619055 682 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC109454.4-201ENST00000623411 649 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AC097655.1-201ENST00000635075 318 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 AL390862.1-201ENST00000635467 1469 ntBASIC0.6□□□□□ -2.31
COL6A5A8TX70 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
COL6A5A8TX70 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
COL6A5A8TX70 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
COL6A5A8TX70 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.59□□□□□ -2.31
COL6A5A8TX70 CYP2C61P-201ENST00000604072 290 ntBASIC0.59□□□□□ -2.31
COL6A5A8TX70 AC004908.2-201ENST00000609090 574 ntBASIC0.59□□□□□ -2.31
COL6A5A8TX70 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.59□□□□□ -2.31
COL6A5A8TX70 AC013470.4-201ENST00000619978 986 ntBASIC0.59□□□□□ -2.31
COL6A5A8TX70 AC091812.1-201ENST00000432235 1948 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.59□□□□□ -2.32
COL6A5A8TX70 CBX3P1-201ENST00000325243 554 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 U8.14-201ENST00000390843 143 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A5A8TX70 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A5A8TX70 AL353898.1-201ENST00000444055 238 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A5A8TX70 AC023050.1-201ENST00000498198 304 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 MRPS33P3-201ENST00000513456 322 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 HSBP1P1-201ENST00000555205 166 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 AC090616.3-201ENST00000582184 217 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 AC002545.1-201ENST00000592511 181 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A5A8TX70 AC112487.2-201ENST00000637950 304 ntBASIC0.59□□□□□ -2.32
COL6A5A8TX70 CCT4P2-201ENST00000233836 1548 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 RNU6-600P-201ENST00000362524 99 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 SNORD114-2-201ENST00000363953 78 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 AC073614.1-201ENST00000438690 650 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.58□□□□□ -2.32
COL6A5A8TX70 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A5A8TX70 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A5A8TX70 EIF4EP5-201ENST00000528228 640 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 MIR4514-201ENST00000581410 57 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.58□□□□□ -2.32
COL6A5A8TX70 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
COL6A5A8TX70 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.58□□□□□ -2.32
COL6A5A8TX70 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A5A8TX70 SNORA3A-201ENST00000364113 130 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 RNU6-1104P-201ENST00000384723 104 ntBASIC0.58□□□□□ -2.32
COL6A5A8TX70 AC079780.1-201ENST00000428259 207 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms