Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.58□□□□□ -2
SRRM4A7MD48 MIR4528-201ENST00000577763 90 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.58□□□□□ -2
SRRM4A7MD48 MIR4801-201ENST00000582704 82 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 MIR3158-1-201ENST00000583596 81 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 AC098848.2-201ENST00000588023 330 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 AC012468.1-201ENST00000604888 430 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 AC098614.4-201ENST00000607601 462 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 AC022893.3-201ENST00000607665 437 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 AL157817.1-201ENST00000614264 790 ntBASIC2.58□□□□□ -2
SRRM4A7MD48 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.58□□□□□ -2
SRRM4A7MD48 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.58□□□□□ -2
SRRM4A7MD48 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SRRM4A7MD48 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 AL049781.1-201ENST00000623195 3585 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRRM4A7MD48 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 RNU6-179P-201ENST00000363350 107 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.57□□□□□ -2
SRRM4A7MD48 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.57□□□□□ -2
SRRM4A7MD48 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.57□□□□□ -2
SRRM4A7MD48 AC096649.2-201ENST00000416186 393 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.57□□□□□ -2
SRRM4A7MD48 AC097713.2-201ENST00000430199 356 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 RPS20P5-201ENST00000434808 360 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC005019.1-201ENST00000436455 431 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 CYCSP32-201ENST00000440548 321 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 BRK1P2-201ENST00000442875 223 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.57□□□□□ -2
SRRM4A7MD48 KLF3P2-201ENST00000465138 268 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 RN7SL601P-201ENST00000471221 293 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 RPL36AP51-201ENST00000487216 318 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC092185.1-201ENST00000491371 97 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.57□□□□□ -2
SRRM4A7MD48 AC109927.2-201ENST00000506416 303 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.57□□□□□ -2
SRRM4A7MD48 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRRM4A7MD48 AL391840.1-201ENST00000571144 367 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 RBM11P1-201ENST00000604951 799 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC068944.2-201ENST00000610373 403 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AL591516.1-201ENST00000611326 274 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 uc_338.11-201ENST00000619132 160 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 AC110079.1-202ENST00000635213 138 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AL512643.1-201ENST00000635735 524 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 U2.21-201ENST00000637295 81 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.57□□□□□ -2
SRRM4A7MD48 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRRM4A7MD48 ELF2P3-201ENST00000445099 1506 ntBASIC2.57□□□□□ -2
SRRM4A7MD48 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.56□□□□□ -2
SRRM4A7MD48 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRRM4A7MD48 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.56□□□□□ -2
SRRM4A7MD48 U3.6-201ENST00000363622 211 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRRM4A7MD48 RNU6-39P-201ENST00000384344 107 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 RPL21P3-201ENST00000395517 478 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRRM4A7MD48 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 RPL32P35-201ENST00000415214 394 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.56□□□□□ -2
SRRM4A7MD48 MTCYBP5-201ENST00000423752 1135 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.56□□□□□ -2
SRRM4A7MD48 AL592045.1-201ENST00000429867 352 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AL159987.2-201ENST00000432754 307 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 NANOGNBP1-201ENST00000448444 480 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC146507.2-201ENST00000460608 476 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC116562.3-201ENST00000506136 177 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC026427.2-201ENST00000506228 536 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.56□□□□□ -2
SRRM4A7MD48 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.56□□□□□ -2
SRRM4A7MD48 RNU1-103P-201ENST00000516502 125 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 RNU6-914P-201ENST00000516749 109 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 RNU6-703P-201ENST00000516946 107 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 RNU6-1315P-201ENST00000517187 99 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 MTND4LP26-201ENST00000518144 282 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC068587.5-201ENST00000528506 175 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC011611.1-201ENST00000552179 197 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.56□□□□□ -2
SRRM4A7MD48 MIR1273C-201ENST00000578669 77 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.56□□□□□ -2
SRRM4A7MD48 AL035413.2-201ENST00000604801 525 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC073657.2-201ENST00000605661 303 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC126118.1-201ENST00000607744 628 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 uc_338.25-201ENST00000613756 156 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 U6atac.1-201ENST00000616025 117 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 AC006133.1-201ENST00000617106 264 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.56□□□□□ -2
SRRM4A7MD48 AC099654.12-201ENST00000639868 649 ntBASIC2.56□□□□□ -2
SRRM4A7MD48 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRRM4A7MD48 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms