Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
CTAGE9A4FU28 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTAGE9A4FU28 AL049781.1-201ENST00000623195 3585 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 TAB3P1-202ENST00000452645 1634 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 HSPE1P11-201ENST00000339579 310 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 SNORA71.3-201ENST00000362582 128 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 RNU1-35P-201ENST00000362782 153 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MIR449B-201ENST00000384995 97 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 SNORD115-47-201ENST00000391226 86 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MIR887-201ENST00000401258 79 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 RPL5P18-201ENST00000406671 891 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MTND1P23-201ENST00000416931 372 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MTATP6P18-201ENST00000417994 673 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MTCO2P19-201ENST00000427513 598 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MRPS10P2-201ENST00000431226 381 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC024082.2-201ENST00000434771 238 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 HMGB3P12-201ENST00000438745 556 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MTCO3P45-201ENST00000443036 613 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC013267.1-201ENST00000458227 267 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 RN7SL601P-201ENST00000471221 293 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AL512360.1-201ENST00000555346 234 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 HMGB1P33-201ENST00000563485 527 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC010653.1-201ENST00000571108 881 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AL606834.2-201ENST00000602954 668 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AL391646.1-201ENST00000603860 190 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC007363.1-201ENST00000604736 620 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC008536.2-201ENST00000607284 349 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 AC017083.3-201ENST00000609955 700 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
CTAGE9A4FU28 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CTAGE9A4FU28 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.15□□□□□ -1.9
CTAGE9A4FU28 CR848007.1-201ENST00000442354 1699 ntBASIC3.15□□□□□ -1.9
CTAGE9A4FU28 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.15□□□□□ -1.9
CTAGE9A4FU28 RNU6-1120P-201ENST00000362988 108 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RNU6-1284P-201ENST00000363701 100 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RNU6-76P-201ENST00000384060 104 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.453-201ENST00000384223 109 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 PPP1R11P2-201ENST00000423543 382 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 USP12PX-201ENST00000432383 1057 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RPL23AP30-201ENST00000432419 501 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 NDUFB4P6-201ENST00000436819 366 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RPL39P40-201ENST00000445481 146 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 SNRPGP6-201ENST00000451124 220 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 MTND2P24-201ENST00000453434 806 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC027673.1-201ENST00000456245 405 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AL121769.1-201ENST00000469473 401 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AP002812.1-201ENST00000495378 474 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC019235.1-201ENST00000503847 207 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 SCARNA24.1-201ENST00000516465 137 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 RNU6-1178P-201ENST00000516674 107 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 HMGB1P41-201ENST00000520234 440 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC100870.1-201ENST00000522035 505 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 OR5AQ1P-201ENST00000527596 927 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AP003072.2-201ENST00000527756 676 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC093012.1-202ENST00000549403 582 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms